Transcript Information: R_Transcript_13170.p1


Annotated TAIR IDAT4G21980.2
Annotated Gene NameUbiquitin-like superfamily protein
Annotated Gene Symbol(s)APG8A, ATG8A
Annotation TypeOrtholog
Chromosome Positionchr4:11655868-11656809 | Forward length=137
E-Value7.1E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.957011253068
Replicate 232.43178546446
Replicate 323.111262038975
Condition 2: 8 Hour
Replicate 133.886688096634
Replicate 250.112333411943
Replicate 337.599764856516
Condition 3: 24 Hour
Replicate 121.317963854297
Replicate 218.707585666115
Replicate 323.451112164533


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_13170.p1 GENE.R_Transcript_13170~~R_Transcript_13170.p1 ORF type:complete len:112 (+),score=24.21,Atg8|PF02991.12|1.3e-41,APG12|PF04110.9|7.4e-07 R_Transcript_13170:76-411(+)
ATGGTTGTTATTGTCCATTTGTTTATCAGTTCTCACCTGGAGGATGAATTAATGCAGGTGATTGTGGAGAAAGCTCCAAGGACCGACATTCCTGACATTGATAAGAAGAAATACCTTGTGCCAGCCGATTTGACTGTTGGGCAGTTTGTCTATGTGGTAAGGAAGAGAGTGAATCTCAGTGCTGAGAAGGCTATATTTGTGTTTGTCAAAAATACTTTACCTCCCACTGCTGCCCTGATGTCGAATGTCTACGAGGAAAACAAGGATGAAGACGGCTTTCTTTACATGACTTACAGCGGAGAGAATGTGTTTGGATCGACCTGTGGTGATAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_13170.p1 GENE.R_Transcript_13170~~R_Transcript_13170.p1 ORF type:complete len:112 (+),score=24.21,Atg8|PF02991.12|1.3e-41,APG12|PF04110.9|7.4e-07 R_Transcript_13170:76-411(+)
MVVIVHLFISSHLEDELMQVIVEKAPRTDIPDIDKKKYLVPADLTVGQFVYVVRKRVNLSAEKAIFVFVKNTLPPTAALMSNVYEENKDEDGFLYMTYSGENVFGSTCGDN*

Click here to download the sequence:
Link to NCBI Protein BLAST