Transcript Information: R_Transcript_131706.p1


Annotated TAIR IDAT2G03820.1
Annotated Gene Namenonsense-mediated mRNA decay NMD3 family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:1165149-1166699 | Reverse length=516
E-Value1E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0758859099326
Replicate 21.066885183755
Replicate 30.97772660471382
Condition 2: 8 Hour
Replicate 11.5428085637492
Replicate 21.3180194581187
Replicate 31.0699120081122
Condition 3: 24 Hour
Replicate 11.3998662943722
Replicate 20.71724419156349
Replicate 31.3791033440931


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_131706.p1 GENE.R_Transcript_131706~~R_Transcript_131706.p1 ORF type:complete len:492 (+),score=83.10,NMD3|PF04981.9|2.6e-24 R_Transcript_131706:119-1594(+)
ATGGCTGGCAGTGGCACCGAAGACGACGTTGATAAAAAGGCGATGAAACTGCGAAAGATTGTTCATAATAAGCCCATGAAGAAGAAATCGACGTCATCGTCGTCGTCCAAGAAGAAGAAGAAGAAGTCACAGGAGGATTTGCTTCCCCAATGTTTTCCTCATCTTGCAACTCTTCATCAGCAATTGAATGAGGATCCATTTGTGAAGAAACTCATGGCCAAACCTCCCCGTGACAAAGACACCCCATCATGCCGTAACTGCGGGGATCCAGGCGACCCATTGTGCTTACTTTGCAGCATTTCTGAAGGAAACCCAACAAGGGGACTACCATGTTTCATTAGTATGTACCAGTGTCCCGATTGCCAGGCCTACTCCCAGTCAACAACTGAAGGTTGGTTTCAAGCTGGTGAAGAATCAAAAGAGCTCCTAGCTTTTCTTCTCCACAAGCTCAAACGCTCTCTGATTAGAGTCAAAGTAGAATTGATTAGCGCTTCACTTTCGCCCAGAGAACCTCATTCTCGGAACCTCGACCTCAGTTTGGCTCTCCTATGGAAGGGTCCACAACAAGAACTCTATCATAGTGTATTGATCCTTGTCAGGGGCAGAACTTGCATGCCTTGCATAGTGAAGGAGCCCGTTGCTGGAACATGGAGCATTGTGGTACAACTTAGGCAGCGTGGCTGCCACAACCTAAGTCGTCTCTACTTGGAAAGATACCTTCTAAGGTTCCCCAATCTAGCTGCTCATAGGGTTAAAACAGTGGATCAGGGTACAGATTTCTTCTTTGTTCAAGAGAAAGAAGCTATAAAGTTCTGCAAGGATCTCTCTAGATACTATCCAATTAAAAGAGAGGAAATTCACAAGATCAACGATAATGAGAGTTGTATCCCAGTTTGGATATGCCCTATATGGAAACATGATCTAGTTCATCTGCCTCCTGATGTCTCTGCCAATGTGGGGAACCTTGGTCCTTTACTGATTTGCACACAGGTGAGGAACAAAATCACTTTATTGGATCCCTTAAGTTTGAGGAAATGCGCTTTAAGTGCTGAAGATTATTGGAACGTACCCTTTGAGCCTCTGATAACTAGTCGGGATCTCATAGAGTTTGTAGTGTTGAATGTGGAGATTATTTTAAAGGGAATGAAGGATTCTTTGGCTGATATAAAAGTTGCTCGAGTATCAGATTTTGGCAATAATGACATGACTTTTTCGGTGAGGAGTCATCTTGGTGAGGCTCTGAAGCCTGGGGACTATGCTCTCGGTTATGACTTGTGTAGAACCAATATCAATGATATGAAACTAGACAAATGCCATGACTTTCAGCAGCTTGATGTGGTTCTGATTAAGAATAAAAATGAGCATCTCCTTAAGGAGGCTAAAATCAAGAAGGATAAAGAGACTGCGAGGGAAGCGGCAAAAAATTGTGAGGTGATGTTCGATTTGTCATTAGATGTTGATCATGTCAAGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_131706.p1 GENE.R_Transcript_131706~~R_Transcript_131706.p1 ORF type:complete len:492 (+),score=83.10,NMD3|PF04981.9|2.6e-24 R_Transcript_131706:119-1594(+)
MAGSGTEDDVDKKAMKLRKIVHNKPMKKKSTSSSSSKKKKKKSQEDLLPQCFPHLATLHQQLNEDPFVKKLMAKPPRDKDTPSCRNCGDPGDPLCLLCSISEGNPTRGLPCFISMYQCPDCQAYSQSTTEGWFQAGEESKELLAFLLHKLKRSLIRVKVELISASLSPREPHSRNLDLSLALLWKGPQQELYHSVLILVRGRTCMPCIVKEPVAGTWSIVVQLRQRGCHNLSRLYLERYLLRFPNLAAHRVKTVDQGTDFFFVQEKEAIKFCKDLSRYYPIKREEIHKINDNESCIPVWICPIWKHDLVHLPPDVSANVGNLGPLLICTQVRNKITLLDPLSLRKCALSAEDYWNVPFEPLITSRDLIEFVVLNVEIILKGMKDSLADIKVARVSDFGNNDMTFSVRSHLGEALKPGDYALGYDLCRTNINDMKLDKCHDFQQLDVVLIKNKNEHLLKEAKIKKDKETAREAAKNCEVMFDLSLDVDHVKK*

Click here to download the sequence:
Link to NCBI Protein BLAST