Transcript Information: R_Transcript_13171.p1


Annotated TAIR IDAT1G62040.2
Annotated Gene NameUbiquitin-like superfamily protein
Annotated Gene Symbol(s)ATG8C
Annotation TypeOrtholog
Chromosome Positionchr1:22932782-22934253 | Forward length=133
E-Value3.7E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.5266427301
Replicate 237.590150745308
Replicate 335.468496923075
Condition 2: 8 Hour
Replicate 144.232530227282
Replicate 265.820337677683
Replicate 356.504207253785
Condition 3: 24 Hour
Replicate 134.436710841556
Replicate 232.72715835376
Replicate 332.125502040446


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_13171.p1 GENE.R_Transcript_13171~~R_Transcript_13171.p1 ORF type:complete len:124 (+),score=31.26,Atg8|PF02991.12|1.4e-50,APG12|PF04110.9|1.2e-06 R_Transcript_13171:482-853(+)
ATGGCCAAAAGCTCCTTCAAAGCGGAACACCCTCTTGAGAAAAGACAAGCAGAAGCTGCTCGTATCAGAGAGAAGTTTCCTGATAGAATTCCTGTGATTGTGGAGAAAGCTCCAAGGACCGACATTCCTGACATTGATAAGAAGAAATACCTTGTGCCAGCCGATTTGACTGTTGGGCAGTTTGTCTATGTGGTAAGGAAGAGAGTGAATCTCAGTGCTGAGAAGGCTATATTTGTGTTTGTCAAAAATACTTTACCTCCCACTGCTGCCCTGATGTCGAATGTCTACGAGGAAAACAAGGATGAAGACGGCTTTCTTTACATGACTTACAGCGGAGAGAATGTGTTTGGATCGACCTGTGGCGATAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_13171.p1 GENE.R_Transcript_13171~~R_Transcript_13171.p1 ORF type:complete len:124 (+),score=31.26,Atg8|PF02991.12|1.4e-50,APG12|PF04110.9|1.2e-06 R_Transcript_13171:482-853(+)
MAKSSFKAEHPLEKRQAEAARIREKFPDRIPVIVEKAPRTDIPDIDKKKYLVPADLTVGQFVYVVRKRVNLSAEKAIFVFVKNTLPPTAALMSNVYEENKDEDGFLYMTYSGENVFGSTCGDN*

Click here to download the sequence:
Link to NCBI Protein BLAST