Transcript Information: R_Transcript_13186.p1


Annotated TAIR IDAT5G58610.1
Annotated Gene NamePHD finger transcription factor, putative
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23686771-23691053 | Reverse length=1065
E-Value2E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.082594332352
Replicate 28.3804975910546
Replicate 39.5854374061153
Condition 2: 8 Hour
Replicate 111.323398918737
Replicate 213.315761182251
Replicate 315.015978313646
Condition 3: 24 Hour
Replicate 113.745124928175
Replicate 210.648998391373
Replicate 315.124122122706


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_13186.p1 GENE.R_Transcript_13186~~R_Transcript_13186.p1 ORF type:complete len:932 (+),score=167.19,Agenet|PF05641.8|4.1e-13,Agenet|PF05641.8|26,PHD|PF00628.25|0.0011,PHD|PF00628.25|0.051 R_Transcript_13186:155-2950(+)
ATGAATGGGCGTAAGCTACTGCTCCATGAGAAAGTCGAGGTGCGACAAGTTGAGGATGGGTTGAGAGGGTCATGGCACCCTGGTGTGGTTGTTGGTGTGTCAGATTCATGCCGCAAGGTCAAGTATGATGAACTGCTGTGTGAAACAGGAAGCTCAAAGCTCATTGAGTCCATACCTGTGACTGAGGTGATCGAGGGTCTTTACCAACGTCCCTGTGTCAAATCAAAATATCGTGGTCGTATCAGGCCCATACCACCTCTTCCACAACCTTGTGCTATGAAGCCAAGGTTGAGTTTTGGAGTTTGTGTTGATGTCTTGTTTAAGGAAGCCTGGTGGGAAGGTGTAATTTTTGATTATGATGAGGGCGCAAATGAGCGTAGTGTTTTCTTTCCTGATGAGGGTGATGAACGCAGATTCAAATCGAGCGATTTACGTGTTACTCTTGAATGGGATGAATTTTCTGGTAGTTGGAAAGAACGGGGTGTTTGGGTGCTCGTTAATTTGGCTAAGGAGCATAAGAAGCATGGTCACATATATCAACTTATTAAGCGTGTCTGGTCCCGCATGAGAGTACATTATGGGTTTTTGAAAATGATTTCAGAATGGACTTGTGGTGCAAATTGTGTGTGGAAGGAATACTTCAGGGAAGTTATAGGTGAACTTATGTCTAAACCAATACTAACAGGTCTTAGTTTTTCAACCAATTCTAGATTACATACAGTGAGGAAAAGAGGTCGCAGACGCAAGAAGTCTTTGTATGCATCTGTTCTCACCAGGTCCATGCATAAAAAAAGGGAGAAAGAACTTGGTCTTGCAGTTAAAACAAGGCGTATGTGTTTGAGTGACTCGGAGAATGCTGTGATCTCTGCTCCCTGCCAGAGCAGCTTCTTAACTGATGTTCAGTGCACCCAAAGTCAATCGAAGGCAGCAGATGATTGCATAAATACTGGGGTTTCTGAGGCAGGTGAAGCTGGTAATTGTGATGAAGCTCCAGATATGTGCTGTGGTCAGATCAGTGAAAGTGTTATGGTCAAGGCCGGAAGTTGTCAGGGGATAACAGCTCAAAATAATTGCACGCCCTGTAGAAATACTGGTATTCTTGAGAATAAGTTTAAGCTGTCTCAAAGTAATGATTGCAGAAGGAAGTGGCGGTTGGTGGAAAACAAATCGACTCCAAGGAAAATGAAGCCTTCAAAAATAAGCAGCAATAAGCTTGAAAGACGTGCTATTAATGGCTCCCAAAAAACAAAGCAGGTGGATGATGCTGTTCCCTTGGAAGTTCAAAAGTACGAATCAGTTGACAGAAGAAAAGAACTGATGATACAAAGGCCAAAGAAGGATGGCATTGTGATGAGGCTTCCCCTCCATAGGCAGCGAAGAACTGTAAGAATATCTAGGCGATGCATCCGAAAGAAAAGAAGTCCCGTGAAGATAAAAAAGATAATCCATAGAAAAATTGAGAACGCTGATATGAAACCAAAACCCCCACTACAGGAAGAGCTGGAAGCATCTAAATCCTTTCAGAAAGATGATGATTCTTTGGCCAGTCATTGCCGAGGGGCTCCCCCTGTTACAGCTTCAGATCAAGTGTCTATTCCTGAAGATACTTTAAATAGTCCTCAAAAACAGAAGGGTAAAAGAGGCAGATGCCGAGATTCAGTTTGCTTTGTCTGTCAGTACGGAGGTGAACTTTTTCACTGTGATCACTGCATGTCTTCATACCATTTGAACTGCGTTGACCTCAAGGAGGTTCCAGTGGGAAAATCGTTTTGTCCATCTTGTAGGTGTGGTTTATGTGGCTTGAATTATTCCTCCAGCAATGATCAACAATTTACTCAAGTGTGTTACCAGTGCAGTCGTCAATATCATGTGAACTGCTTAAATAAAGCAGAGATATCAGTTTCTGAAGACTCTTTTTCAGACAAGTTTTGCAGCAGAAGTTGTTTTGAGATATGTGCTCGCCTTCATGAACTCCTACAAATTTCAAACCCAACAACTGTGGAAGGCTTAAACTGGACCATCACAAGATCCAGAAGAAATGATTATAATGTGCACAATGAGCGAGTTCACCCTGTTGTTCAGGTTTCTCAAGTTTTGAATGTTTTCCATGAGTGTTTTGAACCAATTCTTGAGCCCCATACAGGAAGGGATCTTGTTGCTGATATTGTTTATAATTCAGGGTCAAAGTTTCGGAGGTTGGGTTTTCATGGTTTCTATGTTATAGCCTTGGTCAATGGCGAGGAACTTGTGTGTGTTGCTACAATCAGAATTCATGGCAAAAAAGTTGCAGAAATGCCCCTGGTAGCTACGCGTTTCAAGTATCGTCGAAAGGGCATGTGCCGGGTTCTTGTTGATGAGCTTGAGAAGATGCTTGTAGAAATGGGTGTTGAAAGATTGGTCTTACCAGCTATAGCACAGCTTAGTGATACTTGGGTTTCATCGTTTGGATTTTCAGAGATGCCAACCTCTCTAAGGAAAGAATTGTTGGGATATCCATTTGTTGTTTTTCAAGGGACAACAATGTTCCACAAAATTCTCAGTAGAGCAGTTCCGGCAGAAACTTTGCAAGCATCAGAGAAACTGGAAGAAGCTGCTGCTATACTTCCGCAGGGACTTCAAGCTCAGGATGATCTAAGCAGAAGATTCAGTCTGCGATACAAGCGAAGGCGGAAACCAGAAGCTCCCGATAAGGGTAAGACGGTGATGGATGTACCCGACAAGATTCAATCTACGTACAAGTTCGTATACAAACGAAGGAGGATTCAGGCAAGTAGAGATTCTTTAGAAAGCCTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_13186.p1 GENE.R_Transcript_13186~~R_Transcript_13186.p1 ORF type:complete len:932 (+),score=167.19,Agenet|PF05641.8|4.1e-13,Agenet|PF05641.8|26,PHD|PF00628.25|0.0011,PHD|PF00628.25|0.051 R_Transcript_13186:155-2950(+)
MNGRKLLLHEKVEVRQVEDGLRGSWHPGVVVGVSDSCRKVKYDELLCETGSSKLIESIPVTEVIEGLYQRPCVKSKYRGRIRPIPPLPQPCAMKPRLSFGVCVDVLFKEAWWEGVIFDYDEGANERSVFFPDEGDERRFKSSDLRVTLEWDEFSGSWKERGVWVLVNLAKEHKKHGHIYQLIKRVWSRMRVHYGFLKMISEWTCGANCVWKEYFREVIGELMSKPILTGLSFSTNSRLHTVRKRGRRRKKSLYASVLTRSMHKKREKELGLAVKTRRMCLSDSENAVISAPCQSSFLTDVQCTQSQSKAADDCINTGVSEAGEAGNCDEAPDMCCGQISESVMVKAGSCQGITAQNNCTPCRNTGILENKFKLSQSNDCRRKWRLVENKSTPRKMKPSKISSNKLERRAINGSQKTKQVDDAVPLEVQKYESVDRRKELMIQRPKKDGIVMRLPLHRQRRTVRISRRCIRKKRSPVKIKKIIHRKIENADMKPKPPLQEELEASKSFQKDDDSLASHCRGAPPVTASDQVSIPEDTLNSPQKQKGKRGRCRDSVCFVCQYGGELFHCDHCMSSYHLNCVDLKEVPVGKSFCPSCRCGLCGLNYSSSNDQQFTQVCYQCSRQYHVNCLNKAEISVSEDSFSDKFCSRSCFEICARLHELLQISNPTTVEGLNWTITRSRRNDYNVHNERVHPVVQVSQVLNVFHECFEPILEPHTGRDLVADIVYNSGSKFRRLGFHGFYVIALVNGEELVCVATIRIHGKKVAEMPLVATRFKYRRKGMCRVLVDELEKMLVEMGVERLVLPAIAQLSDTWVSSFGFSEMPTSLRKELLGYPFVVFQGTTMFHKILSRAVPAETLQASEKLEEAAAILPQGLQAQDDLSRRFSLRYKRRRKPEAPDKGKTVMDVPDKIQSTYKFVYKRRRIQASRDSLESL*

Click here to download the sequence:
Link to NCBI Protein BLAST