Transcript Information: R_Transcript_131972.p1


Annotated TAIR IDAT3G53190.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19714171-19717537 | Forward length=483
E-Value2E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7920021352572
Replicate 27.1453378380072
Replicate 38.7549311231368
Condition 2: 8 Hour
Replicate 17.1791017646373
Replicate 26.6731427484166
Replicate 35.7020766346765
Condition 3: 24 Hour
Replicate 17.933064277636
Replicate 29.8151675691051
Replicate 38.823839062257


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_131972.p1 GENE.R_Transcript_131972~~R_Transcript_131972.p1 ORF type:5prime_partial len:191 (-),score=29.60 R_Transcript_131972:189-761(-)
GAGAAAGTAGCACGGAGGATGCCGAGATGCCGAAGAGGATATATAAACATAGTGAACAACGATTTTAGATATTGGGAGATATATGTCATTGGAGGGAGTGACAATCCTACTATCAACAGCCAGGGTAATCGGTACATTGCCCCAAATAATCCAAGTATTAAAGAGGTTACAAAGAGAGTGGAAACAGATGACAAGGATTGGCAAGATTGGAACTGGAGGACGGAAGGGGACATTATGGTAAATGGAGCCTTTTTTGTACCTTCAGGGCAGGGTCTAAGTACTGAGTATGCCAAGGCCTTCAGTGTGGAACCTAAATCTGCAGGGCTCATTGATGTGCTTACTCTCCATGCTGGTGTATTTGGTGACCCAAGTGACAGTGTGAACGTTGCATATGGTGTCGGAACCAGCACGGGTGGTGGTAACACAGCTGGCTTTGGATCTTGTGGTGATGCTGACTACTTTGGGATGATATTTGGGAGTGGCAGCGGGAGCAGCAGCAAGAGCGCCCTCTCACCATGCTTCTCTACACCCCAATTCTTGATTATTTTTGCCATTATTATTTCAGTTTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_131972.p1 GENE.R_Transcript_131972~~R_Transcript_131972.p1 ORF type:5prime_partial len:191 (-),score=29.60 R_Transcript_131972:189-761(-)
EKVARRMPRCRRGYINIVNNDFRYWEIYVIGGSDNPTINSQGNRYIAPNNPSIKEVTKRVETDDKDWQDWNWRTEGDIMVNGAFFVPSGQGLSTEYAKAFSVEPKSAGLIDVLTLHAGVFGDPSDSVNVAYGVGTSTGGGNTAGFGSCGDADYFGMIFGSGSGSSSKSALSPCFSTPQFLIIFAIIISVL*

Click here to download the sequence:
Link to NCBI Protein BLAST