Transcript Information: R_Transcript_131973.p1


Annotated TAIR IDAT5G04310.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1203356-1207352 | Reverse length=518
E-Value1.8E-207
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.023303198345
Replicate 211.78053294579
Replicate 314.749472862119
Condition 2: 8 Hour
Replicate 18.415431845223
Replicate 28.0091771398035
Replicate 310.409929900305
Condition 3: 24 Hour
Replicate 117.301535881748
Replicate 215.251462669675
Replicate 313.141686043893


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_131973.p1 GENE.R_Transcript_131973~~R_Transcript_131973.p1 ORF type:complete len:483 (+),score=56.90,Pec_lyase_C|PF00544.15|1.7e-21 R_Transcript_131973:141-1589(+)
ATGCTTCTCCGAATCCATGTCTTGTTCTGTTTCTTCTTTGTCTCTTTCTTCACCCCTCTCTCGCCGCCTTTTGTCAGAGCCTCCTCCAACCTCATACTTCCCCATCAGCACCCTGATCCTGAGGCTGTTGTTGAAGACTTTGACAGGATGGTCAATGTGTCACTCACTAGAAGGCAAATGCTGGAAATGTCTAAATCATCTTGCCTGACAGGCAATCCGATTGATGACTGCTGGCGGTGCGACCCCCATTGGGCATCCAACCGCCAAAGGCTGGCGGACTGCGGAATCGGGTTCGGGGCTGCGGCGAAGGGCGGGAAGGGAGGCCAAATCTATGTGGTCACAGACTCTTCAGATTCGGACCCTGTGAACCCGAAGCCGGGTACGCTCCGGTACGGTGTGGTCCAGGAGGAGCCACTGTGGATCATCTTCTCAAAGGATATGACCATCAAGCTCAGGTATGAACTTATTGTCAACAATTTCAAGACAATTGATGGCCGGGGGGCCAACGTACACATTACTGGCGGTGGCTGCATCACACTGCAGTATGTCTCCAATGTTATAATCCACAACATTCATGTCCACCATTGTGTACCTGCGGGCAACACCTTTGTGCGGTCCAGCCCCACCCATGTGGGTCACAGGGGGAAATCGGATGGTGATGGGATAACCATCTTTGGCGCCAGTAACATCTGGATAGATCACTGCACTCTCTCTTACTGCACTGATGGGTTGATTGATGCTACAATGGGGTCCACTGGGATCACCATTTCCAATAGTCATTTTTCACACCATAATGATGTCATGCTCTTAGGAGATAGTGAGGGCAATGTCTTGGATGCCGGTATGCAGGTGACTTTGGCATTTAATGTGTTTGCGGAGAAAGTAGTACAGAGGATGCCGAGATGTCGAAGAGGATATATACACATAGTGAACAACGATTTTAGATATTGGGAGATATATGTCATTGGAGGGAGCGACAATCCTACTATCAACAGCCAGGGTAATCGGTACATTGCCCCAAATAATCCAAGTATTAAAGAGGTTACAAAGAGAGTGGAAACAGATGACAAGGATTGGCAAGATTGGAACTGGAGGACGGAAGGGGACATTATGGTAAATGGAGCCTTTTTTGTACCTTCAGGGAAGGGTCTCAGTACTCAGTATGCCAAGGCCTTCAGTGTGGAACCTAAATCTGCAGGGCTCATTGATGTGCTTACTCTCCATGCTGGTGTATTTGGTGACCCAAGTGACAGTGTGAGCGTTGCATATGGTGCCGGAACCAGCACGGGTGGTGGTAACAGCGCTGGCTCTGGGTCTGGTGGTGATGCAGACTACTTTGGGATGATCTTTGGGAGTGGCAGCGGGAGCAGCAGCAAGAGCGACCTCCCACCATGCTTCTCTACACCCCAATTCTTGATTATTTTTGCCATTATTATTTCAGTTTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_131973.p1 GENE.R_Transcript_131973~~R_Transcript_131973.p1 ORF type:complete len:483 (+),score=56.90,Pec_lyase_C|PF00544.15|1.7e-21 R_Transcript_131973:141-1589(+)
MLLRIHVLFCFFFVSFFTPLSPPFVRASSNLILPHQHPDPEAVVEDFDRMVNVSLTRRQMLEMSKSSCLTGNPIDDCWRCDPHWASNRQRLADCGIGFGAAAKGGKGGQIYVVTDSSDSDPVNPKPGTLRYGVVQEEPLWIIFSKDMTIKLRYELIVNNFKTIDGRGANVHITGGGCITLQYVSNVIIHNIHVHHCVPAGNTFVRSSPTHVGHRGKSDGDGITIFGASNIWIDHCTLSYCTDGLIDATMGSTGITISNSHFSHHNDVMLLGDSEGNVLDAGMQVTLAFNVFAEKVVQRMPRCRRGYIHIVNNDFRYWEIYVIGGSDNPTINSQGNRYIAPNNPSIKEVTKRVETDDKDWQDWNWRTEGDIMVNGAFFVPSGKGLSTQYAKAFSVEPKSAGLIDVLTLHAGVFGDPSDSVSVAYGAGTSTGGGNSAGSGSGGDADYFGMIFGSGSGSSSKSDLPPCFSTPQFLIIFAIIISVL*

Click here to download the sequence:
Link to NCBI Protein BLAST