Transcript Information: R_Transcript_131976.p1


Annotated TAIR IDAT3G53190.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19714171-19717537 | Forward length=483
E-Value1.4E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0359788649976
Replicate 20
Replicate 31.3620222354469
Condition 2: 8 Hour
Replicate 10.66178013370933
Replicate 20.30217407893494
Replicate 30.49058407082127
Condition 3: 24 Hour
Replicate 10.49638502113955
Replicate 20.35765284687423
Replicate 30.53240362751912


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_131976.p1 GENE.R_Transcript_131976~~R_Transcript_131976.p1 ORF type:3prime_partial len:370 (+),score=46.61,Pec_lyase_C|PF00544.15|4.2e-11 R_Transcript_131976:141-1247(+)
ATGCTTCTCCGAATCCATGTCTTGTTCTGTTTCTTCTTTGTCTCTTTCTTCACCCCTCTCTCGCCGCCTTTTGTCAGAGCCTCCTCCAACCTCATACTTCCCCATCAGCACCCTGATCCTGAGGCTGTTGTTGAAGACTTTGACAGGATGGTCAATGTGTCACTCACTAGAAGGCAAATGCTGGAAATGTCTAAATCATCTTGCCTGACAGGCAATCCGATTGATGACTGCTGGCGGTGCGACCCCCATTGGGCATCCAACCGCCAAAGGCTGGCGGACTGCGGAATCGGGTTCGGGGCTGCGGCGAAGGGCGGGAAGGGAGGCCAAATCTATGTGGTCACAGACTCTTCAGATTCGGACCCTGTGAACCCGAAGCCGGGTACGCTCCGGTACGGTGTGGTCCAGGAGGAGCCACTGTGGATCATCTTCTCAAAGGATATGACCATCAAGCTCAGGTATGAACTTATTGTCAACAATTTCAAGACAATTGATGGCCGGGGGGCCAACGTACACATTACTGGCGGTGGCTGCATCACACTGCAGTATGTCTCCAATGTTATAATCCACAACATTCATGTCCACCATTGTGTACCTGCGGGCAACACCTTTGTGCGGTCCAGCCCCACCCATGTGGGTCACAGGGGGAAATCGGATGGTGATGGGATAACCATCTTTGGCGCCAGTAACATCTGGATAGATCACTGCACTCTCTCTTACTGCACTGATGGGTTGATTGATGCTACAATGGGGTCCACTGGGATCACCATTTCCAATAGTCATTTTTCACACCATAATGATGTCATGCTCTTAGGAGATAGTGAGGGCAATGTCTTGGATGCCGGTATGCAGGTTACAAAGAGAGTGGAAACAGATGACAAGGATTGGCAAGATTGGAACTGGAGGACGGAAGGGGACATTATGGTAAATGGAGCCTTTTTTGTACCTTCAGGGAAGGGTCTCAGTACTCAGTATGCCAAGGCCTTCAGTGTGGAACCTAAATCTGCAGGGCTCATTGATGTGCTTACTCTCCATGCTGGTGTATTTGGTGACCCAAGTGACAGTGTGAGCGTTGCATATGGTGCCGGAACCAGCACGGGTGGTGGTAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_131976.p1 GENE.R_Transcript_131976~~R_Transcript_131976.p1 ORF type:3prime_partial len:370 (+),score=46.61,Pec_lyase_C|PF00544.15|4.2e-11 R_Transcript_131976:141-1247(+)
MLLRIHVLFCFFFVSFFTPLSPPFVRASSNLILPHQHPDPEAVVEDFDRMVNVSLTRRQMLEMSKSSCLTGNPIDDCWRCDPHWASNRQRLADCGIGFGAAAKGGKGGQIYVVTDSSDSDPVNPKPGTLRYGVVQEEPLWIIFSKDMTIKLRYELIVNNFKTIDGRGANVHITGGGCITLQYVSNVIIHNIHVHHCVPAGNTFVRSSPTHVGHRGKSDGDGITIFGASNIWIDHCTLSYCTDGLIDATMGSTGITISNSHFSHHNDVMLLGDSEGNVLDAGMQVTKRVETDDKDWQDWNWRTEGDIMVNGAFFVPSGKGLSTQYAKAFSVEPKSAGLIDVLTLHAGVFGDPSDSVSVAYGAGTSTGGGN

Click here to download the sequence:
Link to NCBI Protein BLAST