Transcript Information: R_Transcript_13227.p1


Annotated TAIR IDAT5G05270.1
Annotated Gene NameChalcone-flavanone isomerase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1563492-1564827 | Forward length=209
E-Value1.3E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1225.96814643462
Replicate 2337.25307543679
Replicate 3265.40979618619
Condition 2: 8 Hour
Replicate 1297.83287652178
Replicate 2301.87190485601
Replicate 3298.80343636637
Condition 3: 24 Hour
Replicate 1327.25912706799
Replicate 2503.55973303534
Replicate 3217.29860662713


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_13227.p1 GENE.R_Transcript_13227~~R_Transcript_13227.p1 ORF type:complete len:208 (+),score=55.96,Chalcone|PF02431.11|3.5e-28 R_Transcript_13227:238-861(+)
ATGGGCAGTGATGCGATGGTGGATGACATTGCTTTTGCTCCAGAATTCACATTGACGAAACCACTTACTCTATTGGGTTATGGCTGCACAGAGCTTGAAATTCACTTCTTGCAAATAAAGCACACTGCAATTGGAGTTTACACAGAGCCTGCAGTGATAGAACATCTGCAGAAATGGAAGGGTAAATCAGGAAAAGAGCTCGCCGAGGATGATGAATTTTACGAAGCTCTTGCAGCTGCTCCAGTAGAAACTGTAGTGAAAGTAGTGGTGATAAAGGAAATCAAGGCCTCACAGTACGGAACACAGCTTGAGGGTGCTGTTAGGGACCGTTTGGCGGCCGTTGATAAGTATGAAGAAGAAGAGGAAATTGCTCTTGAGAAAGTTGCTCAGTTCTTCCCCACCAAATACCTTAAGAAAACTGCCTCCTTCACTTTCAAGTTCTTCGTATCAGGCGAAGCTGAGATCGTGCTGACAACAGACGAGAAAGACGAATCGAAGATAGCAGTGGAGAACAAAAACGTGGTGGAGATGATCAAGAAGTGGTATTTGGGTGGAAGCAGGGGAGTTTCTCCTTCAACCATAGAGTCCTTGGCCAACAACATTTCAGCTGAGTTATCCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_13227.p1 GENE.R_Transcript_13227~~R_Transcript_13227.p1 ORF type:complete len:208 (+),score=55.96,Chalcone|PF02431.11|3.5e-28 R_Transcript_13227:238-861(+)
MGSDAMVDDIAFAPEFTLTKPLTLLGYGCTELEIHFLQIKHTAIGVYTEPAVIEHLQKWKGKSGKELAEDDEFYEALAAAPVETVVKVVVIKEIKASQYGTQLEGAVRDRLAAVDKYEEEEEIALEKVAQFFPTKYLKKTASFTFKFFVSGEAEIVLTTDEKDESKIAVENKNVVEMIKKWYLGGSRGVSPSTIESLANNISAELSK*

Click here to download the sequence:
Link to NCBI Protein BLAST