Transcript Information: R_Transcript_13241.p1


Annotated TAIR IDAT1G50620.1
Annotated Gene NameRING/FYVE/PHD zinc finger superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18748537-18751005 | Forward length=629
E-Value2.6E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.913609245894
Replicate 26.4120438397078
Replicate 39.5193268812753
Condition 2: 8 Hour
Replicate 18.6506948017214
Replicate 210.229768698602
Replicate 312.369181368863
Condition 3: 24 Hour
Replicate 113.472246157575
Replicate 29.5088541324645
Replicate 312.89670743228


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_13241.p1 GENE.R_Transcript_13241~~R_Transcript_13241.p1 ORF type:complete len:835 (+),score=189.92,PHD|PF00628.25|2e-07,PHD|PF00628.25|1.4e+04,BAH|PF01426.14|5e-06 R_Transcript_13241:173-2677(+)
ATGGACTCGTTACCAGAACCCGAATCCGAAGCTTCGAAGCGACAACGCCCGCCCGAAATCGGCGAAATCGAAGGTGAAATCGGAGGACAAGTGATGGAGAAGGCTTTTAAGAGGAGGAGGAAAGAGAATGGAGAGTTGGAGGTGAGGAGAGTGGCGGAGATAGTGCTGGTGTTGTCGGCGATGGGGAGGATGAGAGGAGGCAGAGATCCTACCGCCGTCGAGAAGGCCATGATGGCTGAGGCGAGGAAGAAAGTGGTGGCGTTGTGTGAGGAGTTGGCTCCTAAGGATATTTTGCCTCGAGAGGCGTTCGGCGTTGTGATTGAGGATTTAGGGCTTGATAAGTTGAAGGAGCAGCGGTTAGGGTTTGGCCCTCCTAAGATGTCGATTTCCGATAAGCTGGCCTATGCCAAGCGCAGGATGGAAGAATCCAAGGCATTTGCAGCTCAGCCTGCATCATATCCATCTCAACTTTTGCATAACACCGGGGCAGTTGGTGAGAACCGTGGGACACCACCAAATGTCCGCGCATACCCGTCTGACAAAGCAGGTCATGTACCGGTTTCTTCAGGAAGTTTTCCGACTCCTGCTCCCATTGTACATGTTTCTACAGCAGCGTCTACACCTTTGCAATTTCGGCCTCCTGGCACTGAAGTTCGACCAGCAGTGGTTCCAGGTGCGGTGCCTAACAACATAGTACGGGATTCTCCCTCGATGGTTCCTCCTAGAGTGGATAGAGCACATATTAAACCTGATGGAAGACCGAACGGTCCTTCATTCGTGCCACATGGTCCAGTGAGCTCCTCAGCTGATCAACTTGTTGGGAGAGCTGCTCATATGCCTATGCAACCTCAACCTGCTCCGTGGGCTAATGCTGGAACAAAGAATAAGGTACCTGACCATCATCTTCCTGTGAGGGTTGATGGTAATGCTACATCAATTGCCCCACAAAAGACCACATCACCTGCCGTTGGTCAAACTCCTAAGCCAGTTGTGAGTCAGACTGCTCCCGTGCCTCTACCTGGTATGCTTCATCCCGTGCAGGCCATGCAATTTGCTCAACCTTCTCCAGTTCCTACTAATCACCACCTAGAGATATCTAAGATGGTACAGAAGCTGCTGAATCCAAAGCTTCCTGAACGTCCTGCTTGGACCCCACCTTCAAGGGAGTACATGATGAGGGCAGTGTCATGTCAATTTTGCAAGGTGATCATTAATGGGGTTGAAAATGTGCTTGTTTGTGATGCTTGTGAGAAGGGTTTTCATTTGGGATGTCTTCAGTCATATAATGCAAAGAGCCTTCCTAAAGGTGAATGGCATTGCCCTAGGTGCTTGACAATGAATCGTGGCAAGCCCTTCCCTCCAAAATATGGCCGTGTTACCCGCAATATGAACGCTCCAAAAGGTTCCTCTAACACAGCTGGAGGTCATCTGTCTTCAGAGAAAAAGGTAGAAACTGTGGACGAGAAGGTGAATAAGCCAAATACAATGATGAATGGAAACTCAGACTTCAAAACTCACCCACAAGCTGGTAATTTAGCTGAAACATCGTCTGGCTCAAATCGTCAACATGGAAATGAGGTCAGTAAAATTGACATGCCTGCCGGCATTAAAAAAGATGAAACTAGCTCAGAAAAGCATCCAAAAGAACCAGCAGGACCTGCTGCAGTCGCCTCTTTATCAACATCTATTAGAGCTTCTTCTGAAAAACGTTCTCAACAGGAGGTGAAATCAGAAATATCTCCGTCAGAAGATAGATTGATGTTTGGGGCAGAATCGACAACTCCAACTACACGACATGTGAGTAATACGTCTAACCAGAAACCCATGGCCAGCAGTCAAAATGATGTAGGGCAACATAGTTTGTCAAATGGCGGTGAAGTTGCAGTTCTTCAACATGGCAATTGCAATGGAGTTGTGGAATGCAATAAACACTTTAATGATGGAACATGTGAAAAAGATGCTGTGCAGAAAATTCCTAATGCAGCAGAGCGAGCTTGTGATCAGGCTAGAGCGCCTGTTGAGCCATCAGTGAATGGCATGCCTAAAATTGACTGGATTGGTGACACAGACAGAATTGTGGATGCAAATAAGTATTTTCAGTCGTGTTGCATAAGTGGAGTGGTATATAAAGTGCATGACTATGCCCTTTTTCGCTCAGACAATGGCAAATTGATGCCTGTGAAGCTCCAGGCCATGTGGGAGGATAGCCAAACTAGTTTGAAATGGCTTTTGGTCCATAAGTGCTACTTTCCTGATGACTTGCCAGAAGAGGTTGGGCGGCCAGGCGCTCCTCAAAGCAATGAGGTTTACGAGTCTACTCATGATAGCAATGTGATGGCTGGTTTCATTGAAGGCCCATGTGAAGTCCTCCCATTTAGAAAATTTGGGGAAGAAATGGAGAGAGCTAATCAAGGTTCTCAGGCAAATGACAGAAAACAGCAAGTTTTCATACGCAATTGGTTCTATGATGAATCAAGACGAGCTTTCTGTCCGAATGCTTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_13241.p1 GENE.R_Transcript_13241~~R_Transcript_13241.p1 ORF type:complete len:835 (+),score=189.92,PHD|PF00628.25|2e-07,PHD|PF00628.25|1.4e+04,BAH|PF01426.14|5e-06 R_Transcript_13241:173-2677(+)
MDSLPEPESEASKRQRPPEIGEIEGEIGGQVMEKAFKRRRKENGELEVRRVAEIVLVLSAMGRMRGGRDPTAVEKAMMAEARKKVVALCEELAPKDILPREAFGVVIEDLGLDKLKEQRLGFGPPKMSISDKLAYAKRRMEESKAFAAQPASYPSQLLHNTGAVGENRGTPPNVRAYPSDKAGHVPVSSGSFPTPAPIVHVSTAASTPLQFRPPGTEVRPAVVPGAVPNNIVRDSPSMVPPRVDRAHIKPDGRPNGPSFVPHGPVSSSADQLVGRAAHMPMQPQPAPWANAGTKNKVPDHHLPVRVDGNATSIAPQKTTSPAVGQTPKPVVSQTAPVPLPGMLHPVQAMQFAQPSPVPTNHHLEISKMVQKLLNPKLPERPAWTPPSREYMMRAVSCQFCKVIINGVENVLVCDACEKGFHLGCLQSYNAKSLPKGEWHCPRCLTMNRGKPFPPKYGRVTRNMNAPKGSSNTAGGHLSSEKKVETVDEKVNKPNTMMNGNSDFKTHPQAGNLAETSSGSNRQHGNEVSKIDMPAGIKKDETSSEKHPKEPAGPAAVASLSTSIRASSEKRSQQEVKSEISPSEDRLMFGAESTTPTTRHVSNTSNQKPMASSQNDVGQHSLSNGGEVAVLQHGNCNGVVECNKHFNDGTCEKDAVQKIPNAAERACDQARAPVEPSVNGMPKIDWIGDTDRIVDANKYFQSCCISGVVYKVHDYALFRSDNGKLMPVKLQAMWEDSQTSLKWLLVHKCYFPDDLPEEVGRPGAPQSNEVYESTHDSNVMAGFIEGPCEVLPFRKFGEEMERANQGSQANDRKQQVFIRNWFYDESRRAFCPNAC*

Click here to download the sequence:
Link to NCBI Protein BLAST