Transcript Information: R_Transcript_132498.p1


Annotated TAIR IDAT3G53690.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19898997-19900044 | Reverse length=320
E-Value4.2E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.613369330968
Replicate 213.922075208651
Replicate 314.200942445054
Condition 2: 8 Hour
Replicate 111.945934111729
Replicate 212.476287172845
Replicate 319.423691149039
Condition 3: 24 Hour
Replicate 121.101380767243
Replicate 214.683689881328
Replicate 317.993935119956


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_132498.p1 GENE.R_Transcript_132498~~R_Transcript_132498.p1 ORF type:complete len:371 (+),score=73.17,IBR|PF01485.17|58,IBR|PF01485.17|51,IBR|PF01485.17|2e-11,IBR|PF01485.17|1.5e-05 R_Transcript_132498:504-1616(+)
ATGGCGACTCATCACCACCAAGTAAGTGACGTCAAAATTCTTCAAGTAAATGACCATAGCAACATGATGAAAAAGAACAAAATCAGCTTTCCGAAAATCGCGATAATTGAACTGAATGAAGATGATGATGACTGTGTTGTTTTTGTGAAAAAAGAGAAGAACTTGTTGGTGCCTACTAATGGAAATGGCATTAAGGACCCAATTTGTGTTGATGATGAGTATTGTAAGAAAACCCCTATATTGGAGAATAATAACAAAAAGAATGTTTTGATGATGGGTGTTGATGATATACAATATGTTGATGACTATGATGATGAAATTAGGATTCTTCGTGTAATACCCTCATCATCATCATCCCCTGGAAAGAGAAGGAAGCCCTTTAGTAGTTTTTCAGTGACTGAAAAAGGCGAATCTTCGGGGTCGAAATATGTCGAAAATGTTGATGAAGCTGTTGAGATAGAGCCTTTGGAGGAGGAAGTGGTGATGTTTACTTGTGAAATTTGTGCTGATACTAAGCCCTCTAAGGAGAATTTTAAAATAAAGGGTTGTTCTCACTCTTATTGCTATGACTGTATGACAAGTTATGTTGCGTCGAAGCTCCAAGAGGGTGTTCCTCGTGTTAATTGTCCGGTTCCTGGTTGTCCTGGAGTTTTGGAGCCGGAGTATTGTAGGGATATACTCCCTCCTGAGGTTTTTGATAGGTGGGGCAAGTTGTTGTGTGAGTCTGTCATAATCGCCTCGCAGAAGTTCTATTGCCCGTTTAAGGATTGTTCAGCATTGTTGATTGATGATGGGGGAGAGACGGTGACACAATCCGAGTGTCCGAGTTGTTTTAGATTGTTTTGTGTGCAATGTAAGGTTGCGTGGCATGATGGTATTCCGTGTGCTGAGTATCAGAAGCTGAGTAAGGATGAGCGAAAGAAAGAGGATATCATGCTGAGGAACCTCGCTAAGAGCCAGAATTGGCAACGGTGCCCAACTTGCAAGTTCTATGTGGAGAAGTCAGAAGGTTGCCTCTATATGAAATGCAGGTGTGGAGTTGCTTTTTGCTACAAGTGTGGAGCTATCCATACCGATCATAGGTACCATTACTGTGCAAAATGTGGACGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_132498.p1 GENE.R_Transcript_132498~~R_Transcript_132498.p1 ORF type:complete len:371 (+),score=73.17,IBR|PF01485.17|58,IBR|PF01485.17|51,IBR|PF01485.17|2e-11,IBR|PF01485.17|1.5e-05 R_Transcript_132498:504-1616(+)
MATHHHQVSDVKILQVNDHSNMMKKNKISFPKIAIIELNEDDDDCVVFVKKEKNLLVPTNGNGIKDPICVDDEYCKKTPILENNNKKNVLMMGVDDIQYVDDYDDEIRILRVIPSSSSSPGKRRKPFSSFSVTEKGESSGSKYVENVDEAVEIEPLEEEVVMFTCEICADTKPSKENFKIKGCSHSYCYDCMTSYVASKLQEGVPRVNCPVPGCPGVLEPEYCRDILPPEVFDRWGKLLCESVIIASQKFYCPFKDCSALLIDDGGETVTQSECPSCFRLFCVQCKVAWHDGIPCAEYQKLSKDERKKEDIMLRNLAKSQNWQRCPTCKFYVEKSEGCLYMKCRCGVAFCYKCGAIHTDHRYHYCAKCGR*

Click here to download the sequence:
Link to NCBI Protein BLAST