Transcript Information: R_Transcript_132569.p1


Annotated TAIR IDAT5G44390.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17882329-17884906 | Reverse length=542
E-Value3E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0056846292626
Replicate 24.7477014586561
Replicate 36.697876490103
Condition 2: 8 Hour
Replicate 12.5297287372398
Replicate 23.138369381219
Replicate 33.184493091296
Condition 3: 24 Hour
Replicate 16.175784400435
Replicate 24.385256153682
Replicate 35.717256195018


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_132569.p1 GENE.R_Transcript_132569~~R_Transcript_132569.p1 ORF type:complete len:513 (+),score=73.11,FAD_binding_4|PF01565.19|5.6e-29 R_Transcript_132569:33-1541(+)
ATGGCGAAACTCCTACCAATCCATGCATTTTTACTTCTTAAAATCAACCTCATTTTCTTATACTATAATCTAGCCCTTCCCCTTAGCCAGGCCACAGAATCTCTTTCAACTTGTTTGACCCTTCACAAAATCACAAACTTCTCTTTATATAATTCTTCACCTGATTATAATCAGCGTCTCAGATTCTCTCTTCAAAACTTGAGAGTTTTTGCAGGACATAAAGTCCACAAACCAACGGCTATTATCCTACCGGAGAGCAAGGAGCAGCTCATTCACACTGTTGCCTGCTGTAGGAGATCAAAATTTGAGATTACAATCCGGTGTGGTGGACACAGCTATGAGGGCTTATCCTCCATGCCACGTGGCGAAAGCCCTTTTGTCATCATTGACATGATGAATCTCAACCGTGTGATTGTTGATGTGGGGTCCGAAACGGCTTGGGTTGAAGGGGGAGCTACTTTGGGGGAGTTATACTATGCTATTGCGGAGCACAGTAGCTACTATGGGTTCCCAGCTGGGGTGGGCCCCACGGTTGGTGTGGGTGGCCATTTTTCGGGTGGCGGGTTCGGAGTTTTGGGCCGGAAGTATGGACTTTCGGCGGACAATGTGGTGGATGCTGTGCTTATTGATGCTGAGGGCCGAGTTTTGGGCCGGACCGACATGGGGGAGGAGGTGTTTTGGGCTTTGAGAGGAGGTGGTGGTGGGAGTTGGGGGGTAGTTTACAAGTGGAAGGTCCAATTAGTGAAAATACCTAAAATAGTTACTTGCTTTAGAGTAACTAAACAAGGCCCAATTCATGAGTTAGCTGAGCTAATATACAAATGGCAATTTGTTGGTCCAAATTTAGATGATGGGTTTCATCTTTCTGTTTACCTTACTGCTAGCACAAGCAATGAAGTGTATGTCACATTTGTTGGATTCTATCTTGGTTCAAAATTTGAGGTAATCTCAATAGTAAAGCATCAGTTTCAAGATTTGGAGATTGGTGAACAAGAGTACCAAGAGATGAGCTGGATTGAATCAGTTTTATTATTCTCAGGCCTCCCAAATGGAAGCACAATCGAGGATTTAAAATCGCGGTATTGGGAAGCTAAATCTTGTGTCAAGACCAAATCTGATTATGTGAAGAAGCCAATTTCAATTGAAGGTTTGAAGGGCATGCTTGAAATGGTGGCATCGGAACCTCAAGGGTTGGTACTTTTAGACCCGTATGGTGGAATTATGGACCAGATAAGCAGTGACTCAATTGCATTTCCTCATCGTAAAGGTAACTTGTACAACATTTTATATGTGGCCTTTTGGAGTGACGAAGATGAAGGTAGGTATTTGAGTTGGATTCGAAAATTGTATGATTATATGACACCTTTTGTGTCATCTAATCCTAGGGCTGCTTATGCTAATTATATGGATCTTGATCTTGGTACGATGAATTTGATGAGAGGTAATAAAATTGCACTTGATGGCAATGTCGTGGAGATTGCAAGGGCTTGGGGGAGAAATACTTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_132569.p1 GENE.R_Transcript_132569~~R_Transcript_132569.p1 ORF type:complete len:513 (+),score=73.11,FAD_binding_4|PF01565.19|5.6e-29 R_Transcript_132569:33-1541(+)
MAKLLPIHAFLLLKINLIFLYYNLALPLSQATESLSTCLTLHKITNFSLYNSSPDYNQRLRFSLQNLRVFAGHKVHKPTAIILPESKEQLIHTVACCRRSKFEITIRCGGHSYEGLSSMPRGESPFVIIDMMNLNRVIVDVGSETAWVEGGATLGELYYAIAEHSSYYGFPAGVGPTVGVGGHFSGGGFGVLGRKYGLSADNVVDAVLIDAEGRVLGRTDMGEEVFWALRGGGGGSWGVVYKWKVQLVKIPKIVTCFRVTKQGPIHELAELIYKWQFVGPNLDDGFHLSVYLTASTSNEVYVTFVGFYLGSKFEVISIVKHQFQDLEIGEQEYQEMSWIESVLLFSGLPNGSTIEDLKSRYWEAKSCVKTKSDYVKKPISIEGLKGMLEMVASEPQGLVLLDPYGGIMDQISSDSIAFPHRKGNLYNILYVAFWSDEDEGRYLSWIRKLYDYMTPFVSSNPRAAYANYMDLDLGTMNLMRGNKIALDGNVVEIARAWGRNTS*

Click here to download the sequence:
Link to NCBI Protein BLAST