Transcript Information: R_Transcript_132716.p1


Annotated TAIR IDAT5G52270.1
Annotated Gene NameSNARE-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21221643-21222600 | Reverse length=214
E-Value4E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.90697942632143
Replicate 20.65205901913969
Replicate 30.71138936634014
Condition 2: 8 Hour
Replicate 10.30417223536951
Replicate 20.83332478911251
Replicate 30.78920046175596
Condition 3: 24 Hour
Replicate 11.2833556835363
Replicate 20.95892429959032
Replicate 30.81569085789679


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_132716.p1 GENE.R_Transcript_132716~~R_Transcript_132716.p1 ORF type:5prime_partial len:161 (+),score=10.40,Longin|PF13774.2|2.3e-10 R_Transcript_132716:2-484(+)
TGTTTGGTTGCCAATGGAGTTTGCTTCATCACATTGTGTGATTCTTCATATCCGAGAACGCTAGCCTTCAATTATCTTGAAGATTTGATGCAAGAATTGGTGAGATTTGAAGGTGATCAACTTGTTGAGATAATTACAAAACCATATAGTTTTCTCAAGTTTGACAATGTCATTAGCAATAAAAGGAAGCAATACATAGACACAAGAACGCAAGTCAATCTAAAGAAGTTAAAAGCTAGTCATGGGCAAGAGCTAGACATCATTACCGAAACCATGTCCGCGGTTTTGGAAAATAGAATGAAAATAGATTATTTAGAAAAAGTAGTGATGGCTCCTCAAGTTGTTTCATCTATATGGGGTTCACGGCGTCTCGAGATAATCGCATTGAAATGGATGCCAATCGGGATAACAATAAGCGTTGTAGTCACAATTGTGTTGTGGGCATCCTTGAGCATGACAGATTGCATTGTTTTGGGCTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_132716.p1 GENE.R_Transcript_132716~~R_Transcript_132716.p1 ORF type:5prime_partial len:161 (+),score=10.40,Longin|PF13774.2|2.3e-10 R_Transcript_132716:2-484(+)
CLVANGVCFITLCDSSYPRTLAFNYLEDLMQELVRFEGDQLVEIITKPYSFLKFDNVISNKRKQYIDTRTQVNLKKLKASHGQELDIITETMSAVLENRMKIDYLEKVVMAPQVVSSIWGSRRLEIIALKWMPIGITISVVVTIVLWASLSMTDCIVLGS*

Click here to download the sequence:
Link to NCBI Protein BLAST