Transcript Information: R_Transcript_132717.p1


Annotated TAIR IDAT5G52270.1
Annotated Gene NameSNARE-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21221643-21222600 | Reverse length=214
E-Value8E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5326913778772
Replicate 21.2822168193159
Replicate 31.5737453310334
Condition 2: 8 Hour
Replicate 11.1214899975838
Replicate 21.7069375451287
Replicate 31.1084953050618
Condition 3: 24 Hour
Replicate 11.0515026211162
Replicate 21.1785252842293
Replicate 31.5037354365044


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_132717.p1 GENE.R_Transcript_132717~~R_Transcript_132717.p1 ORF type:5prime_partial len:131 (+),score=10.31,Longin|PF13774.2|4.8e-10 R_Transcript_132717:2-394(+)
TGTTTGGTTGCCAATGGAGTTTGCTTCATCACATTGTGTGATTCTTCATATCCGAGAACGCTAGCCTTCAATTATCTTGAAGATTTGATGCAAGAATTGGTGAGATTTGAAGGTGATCAACTTGTTGAGATAATTACAAAACCATATAGTTTTCTCAAGTTTGCTAGTCATGGGCAAGAGCTAGACATCATTACCGAAGCCATGTCCGCAATTATAGAAAACAGAAGGAAAATAGTGATGGCTCCTCAAGTTGTTTCACCTATATGGGGTTCACGACGTCTCGAGATAATGGCGTTGAAATGGATGCCAATCGGGATAACAATAAGCGTTGTAGTCACTATTGTGTTGTGGGCTTCCTTCAGTATGACAGACTGCATTGTTTTGGGCTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_132717.p1 GENE.R_Transcript_132717~~R_Transcript_132717.p1 ORF type:5prime_partial len:131 (+),score=10.31,Longin|PF13774.2|4.8e-10 R_Transcript_132717:2-394(+)
CLVANGVCFITLCDSSYPRTLAFNYLEDLMQELVRFEGDQLVEIITKPYSFLKFASHGQELDIITEAMSAIIENRRKIVMAPQVVSPIWGSRRLEIMALKWMPIGITISVVVTIVLWASFSMTDCIVLGS*

Click here to download the sequence:
Link to NCBI Protein BLAST