Transcript Information: R_Transcript_132720.p1


Annotated TAIR IDAT5G52270.1
Annotated Gene NameSNARE-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21221643-21222600 | Reverse length=214
E-Value2.3E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5085091698115
Replicate 20.86761571968174
Replicate 31.5144950476795
Condition 2: 8 Hour
Replicate 10.80945008090067
Replicate 20.5544020291203
Replicate 31.6501464200352
Condition 3: 24 Hour
Replicate 11.8973394403061
Replicate 20.36454973372855
Replicate 32.3515715779311


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_132720.p1 GENE.R_Transcript_132720~~R_Transcript_132720.p1 ORF type:3prime_partial len:121 (+),score=16.75,Longin|PF13774.2|1.2e-15 R_Transcript_132720:93-452(+)
ATGGTTAAGCTAACTATTATTGGGAGGATTAGAGACGGTTTGCCATTGGCACAAGGTGTAAGATATGTCAATGAAGAATACAACAACTTATCATTTTACAAGCAACAAGCTGAATTCATCCTCAAAGAAATCTCAAGAGGTAGTTTAGCACCTCATTCTAAGATAACCATTCGCCTTGATCACCAGCATTCTTTCAATTGTTTGGTTGCCAATGGAGTTTGCTTCATCACATTGTGTGATTCTTCATATCCGAGAACGCTAGCCTTCAATTATCTTGAAGATTTGATGCAAGAATTGGTGAGATTTGAAGGTGATCAACTTGTTGAGATAATTACAAAACCATATAGTTTTCTCAAGTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_132720.p1 GENE.R_Transcript_132720~~R_Transcript_132720.p1 ORF type:3prime_partial len:121 (+),score=16.75,Longin|PF13774.2|1.2e-15 R_Transcript_132720:93-452(+)
MVKLTIIGRIRDGLPLAQGVRYVNEEYNNLSFYKQQAEFILKEISRGSLAPHSKITIRLDHQHSFNCLVANGVCFITLCDSSYPRTLAFNYLEDLMQELVRFEGDQLVEIITKPYSFLKF

Click here to download the sequence:
Link to NCBI Protein BLAST