Transcript Information: R_Transcript_13305.p1


Annotated TAIR IDAT1G15215.2
Annotated Gene NameBEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:5238096-5239770 | Forward length=258
E-Value2E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.888541132149
Replicate 212.982445295574
Replicate 314.863150348648
Condition 2: 8 Hour
Replicate 113.364422471206
Replicate 28.7053814801562
Replicate 313.579067487007
Condition 3: 24 Hour
Replicate 114.020034948216
Replicate 213.132138881412
Replicate 311.862801776868


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_13305.p1 GENE.R_Transcript_13305~~R_Transcript_13305.p1 ORF type:complete len:262 (+),score=53.97,SAWADEE|PF16719.1|6.1e+03,SAWADEE|PF16719.1|2.2e-40,Homeobox|PF00046.25|1.1e-05 R_Transcript_13305:225-1010(+)
ATGGACCGTTTAAGGCCAAGGGAAAGGAAGGGGGTCTTTTCTGGGTTCACTGATACCGAGGTTGAGAAGCTGGAAAAATTGTTTGCAGAATGTGGAGAACAGTCACTGAACCGAAAATTCTATCAAAGAGTTGCAAAAAGTTTTAGTCGCTCTGCTGCACGAGCTGGAAAACCAGTTGTAAAGGTGGATCAGGTGCAAAATTGGTTCCAAAACAGGCAGAAAACGTCTCCAGTTAAAGTAACTCCACCATCCATCCTGCAAAAAGAGATTACTCCTTCACTGGATGTGTCTAAAAATTTAGGTGCTCATCCGGATGCCTCTGACCAAAAGAAGGCCAATGAAACTAACGAAGTGCCTAAAGCAGGGAAGAAGTTACCAGATTTATCAGAGTTGGAGTTTGAGGCTAGGTCATCAAGGGACGGCGCATGGTATGATGTTGATAGATTCCTTACCCACAGATTCATTAGCTCAACAGGTGAAGCTGAAGTTCGTGTTAGATTTGTAGGATTTGGGGCTGAAGAGGATGAGTGGGTTAATGTTAAGAATGATGTGCGAGAACAATCTATCCCCCTGGAGAACTGGGAATGTCAGACCATCAAAGTTGGTGACGGCATGCTATGCCTTCAGGAAAGAAAAGATCAAGCAATATACTATGATGCACATATTCTAGACATTCAAAGAAAAATGCATGATATAAGGGGCTGCAGGTGCATATTCCTGATCCAGTATGACCATGATAAGAGCGAGGAAAAGGTTCGTTTGAGGAGATTATGTCGCAGGCCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_13305.p1 GENE.R_Transcript_13305~~R_Transcript_13305.p1 ORF type:complete len:262 (+),score=53.97,SAWADEE|PF16719.1|6.1e+03,SAWADEE|PF16719.1|2.2e-40,Homeobox|PF00046.25|1.1e-05 R_Transcript_13305:225-1010(+)
MDRLRPRERKGVFSGFTDTEVEKLEKLFAECGEQSLNRKFYQRVAKSFSRSAARAGKPVVKVDQVQNWFQNRQKTSPVKVTPPSILQKEITPSLDVSKNLGAHPDASDQKKANETNEVPKAGKKLPDLSELEFEARSSRDGAWYDVDRFLTHRFISSTGEAEVRVRFVGFGAEEDEWVNVKNDVREQSIPLENWECQTIKVGDGMLCLQERKDQAIYYDAHILDIQRKMHDIRGCRCIFLIQYDHDKSEEKVRLRRLCRRP*

Click here to download the sequence:
Link to NCBI Protein BLAST