Transcript Information: R_Transcript_133188.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41907308314405
Replicate 20.42849592686323
Replicate 30.20452444282279
Condition 2: 8 Hour
Replicate 10.31231970595976
Replicate 20.17112919776418
Replicate 30.2315256456682
Condition 3: 24 Hour
Replicate 10.20498042167593
Replicate 20.19692195438015
Replicate 30.25126191604857


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_133188.p1 GENE.R_Transcript_133188~~R_Transcript_133188.p1 ORF type:complete len:784 (+),score=135.22,Retrotrans_gag|PF03732.13|5.4e-20,Retrotrans_gag|PF03732.13|4.2e+03,gag-asp_proteas|PF13975.2|7.7e+03,gag-asp_proteas|PF13975.2|5.4e-12,Asp_protease_2|PF13650.2|3.3e-06 R_Transcript_133188:219-2570(+)
ATGCCAAGAACTAGGGAAGGTAAGGGTGTCTCACTCGATTCCATTCTATCCGGCCCTATTCCGAAAGGCAAAAGAAGTCAAGCAAGGAAAGCCAGCGAATCTACAAGAATGGCAGAGCAACCGCCACCACCACAACAACGCACATTGAGAGATTATGTGTCGCCACAATCACAAAATGTGGGTTCGAGTATTCTAAGACCTAACATTCAAGCCACAAACTTCGAGTTGAAGCCTGCTCTTATTCGAATGGTGCAACAAAGCCAATTCTCGGGGTTTCTAAATGAAGATCCTAACCTTCATTTAGGGGTTTTCCTTGAATATTGTAACACCATCAAACAAGAGGGGGTTACACAAGACAATATCAGGTTATGGTTGTTTCCATTTTCTTTGAGTGGAAGAGCAAGGTCATGGTTACAATCCTTGCCACGTGACTCCATTACGACATGGGAAGAGTTATGTCAAGCATTTTTATCCAAATACTTCCCACCTTACAAGGCGGATGAGTTGCGAGGGCAAATTCAAAACTTTACTCAAAAAGATGGGGAATCATATTATGAAGCATGGGAGAGATACAAAGAACTCCAACGGATGTGCCCACACCATGGTCTTGAGAAATGGCTCATCGTGCACTCGTTTTACAAAGGACTCTCTCCCAACACCAGGATGAATGTAGATGCACATGCCGGAGGTGGAATCATGAACAAGCCATTAGATGAAGTACTTCAACTTTTTGAAGAGATTTCTCAAAATTATGGCATGTTTACAAATGAGCGAGCTCCGAAAAAGGTAACCTCTGGTAAGCATGAAATTGATGTCATTGATCATTTAACTTCCAAAGTTGATGCTTTATTTAGTAGACTTGATAAGATGACTATTAATGCATGCAATTCATCCAATGCTCATTGTGAAATTTGTGGTATTGATGGACATGATGCTTCTTCATGCCAAATGAACCCTCCCTCTACTCTTGAAGCTTGCATGGAACATGTGAACTATCTAAACAACTATGCCCCTAGGAATGACCCCTTCTCAAATACCTATAATCCAGGTTGGAAGAATCATCCAAACCTCTCTTATAGGAACCCCACTCAAAACCAAGCCCCACAAAGACCGCCAGGTTTTTATGCCCCTAGGAATCCCAATCCACAACCCATGCATCCTCCGCAAAGGAATGATCTAAGAGAACTAGTTGAGAAATTTGTAGTGGCCCAAAAGAAGCAAAATGAAGAGTTTGTTGATGTCATAAAACAACTAGCCTCTAAGGTAGACAATCTAGCTACCCATAACAAGATGCTAGAAACACAAATTGCACAACAAGCTAGCTCTTCGTTTAGACCCACCGGTGTGCTCCCAGGCCAACCTGAACCAAATCCTAAGGAGCATTGTAAGGCCATTACATTGAGGAGTGGAAAAGGGTATGAGGGCCCTAGGATGGAAAAGAATGAGAGGGAAAAAGAGAGTGAGGATGACCTTGTGACACAAGAAGAGGGTGACAAAGAAAAGAGTGAAGAAAAGAAGGAAGAAGGAAAAGAGAAGTATGTGCCTCCGGAACCATATAAGTCACCCTTGCCTTTTCCTCAAAGGTTGGCTAAGTCCAAAAATGAGAAGCAATTTGGTAAGTTCATGGAAATTCTTAAGAAATTGCACATTAGTGTTCCTTTTGTTGATGCTATTTCTCAAATGCCTTCTTATGCTAAATTTTTGAAAGAGATCTTGTCTAACAAAAGAAAGCTTGAAGATTATGAAACTGTGGCTCTAACGGAAGAATGTAGTGCAATTATTCAAAATAAATTGCCAACTAAACTCAAGGACCCTGGTTCATTTTCTATTCCATGTGTGATTGGCGATGTTGCTATTAACCGTGCTTTATGTGATTTGGGAGCAAGTGTAAGCTTGATGCCCTTATCAATTTGCAAGAAACTCAAGATGGGTGATCTCAAACCCACAACCATATCACTACAATTGGCGGATAGATCGGTAAAATACCCGGTAGGTATATTAGAGGATGTACCTATCAAGGTTGGTAAGTTTTTCATTCCCGCTGATTTTGTGATTCTTGACATGGAGGAAGACTCTCAAATACCCATCATTTTAGGAAGGCCATTTTTAGCCACTGCTGGAGCAGTAATTGATGTGAAAAATGGAAGGCTTTATTTAAATGTAGGGGATGAGAAAGTTGAGTTTAAACTGTCTAATGCCATGAGTTTTTCTATTGATGATTCTTGTTACAGAATTGACATCATTGACAGGATCCTAAGAGAGGAATATCCAAGACATACCTCCACAGACCCCTTGGAGACGTGCCTGGTGAAAGATGGTGGATTGTGGAAGATAGAGAAGAACAGGCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_133188.p1 GENE.R_Transcript_133188~~R_Transcript_133188.p1 ORF type:complete len:784 (+),score=135.22,Retrotrans_gag|PF03732.13|5.4e-20,Retrotrans_gag|PF03732.13|4.2e+03,gag-asp_proteas|PF13975.2|7.7e+03,gag-asp_proteas|PF13975.2|5.4e-12,Asp_protease_2|PF13650.2|3.3e-06 R_Transcript_133188:219-2570(+)
MPRTREGKGVSLDSILSGPIPKGKRSQARKASESTRMAEQPPPPQQRTLRDYVSPQSQNVGSSILRPNIQATNFELKPALIRMVQQSQFSGFLNEDPNLHLGVFLEYCNTIKQEGVTQDNIRLWLFPFSLSGRARSWLQSLPRDSITTWEELCQAFLSKYFPPYKADELRGQIQNFTQKDGESYYEAWERYKELQRMCPHHGLEKWLIVHSFYKGLSPNTRMNVDAHAGGGIMNKPLDEVLQLFEEISQNYGMFTNERAPKKVTSGKHEIDVIDHLTSKVDALFSRLDKMTINACNSSNAHCEICGIDGHDASSCQMNPPSTLEACMEHVNYLNNYAPRNDPFSNTYNPGWKNHPNLSYRNPTQNQAPQRPPGFYAPRNPNPQPMHPPQRNDLRELVEKFVVAQKKQNEEFVDVIKQLASKVDNLATHNKMLETQIAQQASSSFRPTGVLPGQPEPNPKEHCKAITLRSGKGYEGPRMEKNEREKESEDDLVTQEEGDKEKSEEKKEEGKEKYVPPEPYKSPLPFPQRLAKSKNEKQFGKFMEILKKLHISVPFVDAISQMPSYAKFLKEILSNKRKLEDYETVALTEECSAIIQNKLPTKLKDPGSFSIPCVIGDVAINRALCDLGASVSLMPLSICKKLKMGDLKPTTISLQLADRSVKYPVGILEDVPIKVGKFFIPADFVILDMEEDSQIPIILGRPFLATAGAVIDVKNGRLYLNVGDEKVEFKLSNAMSFSIDDSCYRIDIIDRILREEYPRHTSTDPLETCLVKDGGLWKIEKNRH*

Click here to download the sequence:
Link to NCBI Protein BLAST