Transcript Information: R_Transcript_133192.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.5888051920877
Replicate 20
Replicate 30.14778540384614
Condition 2: 8 Hour
Replicate 10.15797332224029
Replicate 20.4327912614423
Replicate 30.5855358264641
Condition 3: 24 Hour
Replicate 10.29622977068005
Replicate 20.4268759785273
Replicate 30.42363299393995


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_133192.p1 GENE.R_Transcript_133192~~R_Transcript_133192.p1 ORF type:5prime_partial len:155 (+),score=21.09,RVT_1|PF00078.23|5.3e-06 R_Transcript_133192:2-466(+)
GGGGCTTCGACAAGCGACCCATTATCCCCTTATCTGTTTCTCTTATGTGCAGAAGATCTTTCTAGCATGTTGGCTGCAGCAGTAAACAATGATGATTTTCAAGGGCATAAAATTTATGAAGGAGCGCCGATAATTTCTCATTTGTTCTTTGCGGATGACTCCATCATTTTCTCTAAGGCGGATGAGGCCCATGCAAGAAAGATAGATGAGATACTGCACATTTATGAGGAAGCCTCGGTCAACAAGTCAATAAGGCCAAAACCACCATATCCTTTAGCCGTGGAGCGCATGAGGAATTACGGAAAAAAAATTTCAGATTTGCTCCAAGTTCAAGTGGTGGAGGGACAACACAAGTACTTAGGCCTACCGACCCATGTTGGAAGATCTAAAAAGAAAGCGTTTCTCACCATTAAAGATCGAGTTCGGAAGAAACTTCAAGGGTGGATGGAAAAATACCTCTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_133192.p1 GENE.R_Transcript_133192~~R_Transcript_133192.p1 ORF type:5prime_partial len:155 (+),score=21.09,RVT_1|PF00078.23|5.3e-06 R_Transcript_133192:2-466(+)
GASTSDPLSPYLFLLCAEDLSSMLAAAVNNDDFQGHKIYEGAPIISHLFFADDSIIFSKADEAHARKIDEILHIYEEASVNKSIRPKPPYPLAVERMRNYGKKISDLLQVQVVEGQHKYLGLPTHVGRSKKKAFLTIKDRVRKKLQGWMEKYLS*

Click here to download the sequence:
Link to NCBI Protein BLAST