Transcript Information: R_Transcript_133206.p2


Annotated TAIR IDAT5G19520.1
Annotated Gene Namemechanosensitive channel of small conductance-like 9
Annotated Gene Symbol(s)MSL9, ATMSL9
Annotation TypeHomolog
Chromosome Positionchr5:6586079-6588771 | Forward length=742
E-Value2E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66173876572999
Replicate 20.44403052239905
Replicate 30.41522787183358
Condition 2: 8 Hour
Replicate 10.14795084560269
Replicate 20.6079998083706
Replicate 31.316128866735
Condition 3: 24 Hour
Replicate 10.13871786844534
Replicate 20.39979321251802
Replicate 30.92576394446091


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_133206.p2 GENE.R_Transcript_133206~~R_Transcript_133206.p2 ORF type:complete len:331 (+),score=38.21,MS_channel|PF00924.14|1.3e-06 R_Transcript_133206:1243-2235(+)
ATGGCAGTTCTTTGGCTACTCAAGGATTTCATATTACTTTCATGGCAGGGTAACACCCTCAGGGACAAAAAATTCCGGAGAAAGCTTACACATTGGTACTGCCTCTATAAACTTGATCTTATCAAGTTCAAGAGAAAGCCACCTGATACAGAGGAAATTCAACCCACAGAACAAAAACCTTGGTATACTAGAATTTTCCTTAATCCTCTAGTGGTGAGCCAAGAGACTAAATGGAAGAGAAAAGAAGATCAGTGGAAAGAAGCCATAGAAAAATTAGTGCATCTTGTAGCCGAGGTACAACACCAGGATGATAGTTGCCCTGTTTCAATACATGATAAAGAATTCTTTGCTCAAGCTTTTCTACCTGATTGCGCTACATTCTTGCCCGATGATGAGGAGATTTCTAATTCTATGATCAGGTCGCCAGTGACACAGGAGAACCTTGATATGGTGAACAAATTTGATAGAAGTGCTGCAGGAACAATAGCTGCCGATAGCTTTCCCACTTGGACGAGGAGAGCATATGAAAATTGTTCGCAATTGCAACGGTTGATAACTAGTGGGCACGATGTTGTGAATTTTTTGAACAATATAATGATGGGGTTCATGATAGCTCTAATTCTCATCATTTGGCTGCGCCTCACCCAAATTTTACCGACCCAAGCAATTCTGGCGGTCACATCACCAATTTTAGGGGCAACCTTTATTTTTGGAGACACTCTCAAGACTATGTTTCAAGGATTCATATTTGTCTACATTACCCATCCCTTTGCTATTGGCGATGTATGCGTCATAAATCAAACTCAGATGGAGGTTAAGGAAATTGGAATTTGGAGGACAATATTTACAAAAATTGGTACAAAAGATCAAGTTGTGTACCCAAACTCTGTTTTGGCCCGTAGTGCCATCATTAGTTATGAAGGCGACACAGTTGATCTGAATGATTCCGTGGAGTTTGGTTCAGATTCTGCTATGGAATTGGAAATCCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_133206.p2 GENE.R_Transcript_133206~~R_Transcript_133206.p2 ORF type:complete len:331 (+),score=38.21,MS_channel|PF00924.14|1.3e-06 R_Transcript_133206:1243-2235(+)
MAVLWLLKDFILLSWQGNTLRDKKFRRKLTHWYCLYKLDLIKFKRKPPDTEEIQPTEQKPWYTRIFLNPLVVSQETKWKRKEDQWKEAIEKLVHLVAEVQHQDDSCPVSIHDKEFFAQAFLPDCATFLPDDEEISNSMIRSPVTQENLDMVNKFDRSAAGTIAADSFPTWTRRAYENCSQLQRLITSGHDVVNFLNNIMMGFMIALILIIWLRLTQILPTQAILAVTSPILGATFIFGDTLKTMFQGFIFVYITHPFAIGDVCVINQTQMEVKEIGIWRTIFTKIGTKDQVVYPNSVLARSAIISYEGDTVDLNDSVEFGSDSAMELEIH*

Click here to download the sequence:
Link to NCBI Protein BLAST