Transcript Information: R_Transcript_133208.p1


Annotated TAIR IDAT5G19520.1
Annotated Gene Namemechanosensitive channel of small conductance-like 9
Annotated Gene Symbol(s)MSL9, ATMSL9
Annotation TypeHomolog
Chromosome Positionchr5:6586079-6588771 | Forward length=742
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44519416962729
Replicate 20.51210488820239
Replicate 30.55870091697933
Condition 2: 8 Hour
Replicate 10.39814414548366
Replicate 21.0907747239603
Replicate 30.66408331538001
Condition 3: 24 Hour
Replicate 10.93324419624813
Replicate 20.53793314367262
Replicate 30.62282086507431


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_133208.p1 GENE.R_Transcript_133208~~R_Transcript_133208.p1 ORF type:complete len:246 (+),score=48.23 R_Transcript_133208:570-1307(+)
ATGATCAGCTCGGCAGTGACACAGGAGAACGTTGATATGGTGAACAAATTTGATAAAAGTGCTGCAGGATCAATAGCTGCCGATAGCTCTCCCACTTGGACGCTGGAGGTTAAGGAAATTGGAATTTGGAGGACAATATTTACAAAAATTGGTACAAAAGATCAAGTTGTGTACCCAAACTCTGTTTTGGCCCGTAGTGCCATCATTAGTTATGAAGGCGACACAGTTGATCTGAATGATTTCGTGGAGTTTGGTTCAGATTCTACTATGGACTTGGAAAAGATTGACATATTGGCAAAATACATTAGACAGTATATTTCAAAAGGTGCACTGGAAGCAAATAAACAACTACTTAATGCACAAAGATATTCACAAGTTTTGGCAAGTAATGAAATCGAGGAAATTGATGCTGATCATGATCAGCAACTACATAATGCAACAAGACTTTCACAAGTTTCGGCAAGCAATGAAATCGAGGAAATTGATGCTGATCATGGTCTCCAAGCTAGTATAAATGCTCATGTTGATGCCTGTGATGCATTTCAGCAAAAATTTCACAATAAAGTGGTGGTGGAGGTACAACAGGTGCAAGATAATACGAAGGTGATTATCCACTTCAAGCATGAGATAACTATTCTTGATAGAATGTCAAGCGCAGAGGTTTCTATTGAAAAAATCAAAAGGAAATCAAAAATTTTAGGATATATAGCTAATTTGTTACGAGAAGCTCCTAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_133208.p1 GENE.R_Transcript_133208~~R_Transcript_133208.p1 ORF type:complete len:246 (+),score=48.23 R_Transcript_133208:570-1307(+)
MISSAVTQENVDMVNKFDKSAAGSIAADSSPTWTLEVKEIGIWRTIFTKIGTKDQVVYPNSVLARSAIISYEGDTVDLNDFVEFGSDSTMDLEKIDILAKYIRQYISKGALEANKQLLNAQRYSQVLASNEIEEIDADHDQQLHNATRLSQVSASNEIEEIDADHGLQASINAHVDACDAFQQKFHNKVVVEVQQVQDNTKVIIHFKHEITILDRMSSAEVSIEKIKRKSKILGYIANLLREAPN*

Click here to download the sequence:
Link to NCBI Protein BLAST