Transcript Information: R_Transcript_133273.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value5E-157
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.20664337877
Replicate 26.4670329824327
Replicate 37.0554633253036
Condition 2: 8 Hour
Replicate 16.7373837842523
Replicate 211.157483136362
Replicate 313.716206793229
Condition 3: 24 Hour
Replicate 113.199560623731
Replicate 210.099225323611
Replicate 316.314654622882


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_133273.p1 GENE.R_Transcript_133273~~R_Transcript_133273.p1 ORF type:complete len:487 (+),score=55.02,MatE|PF01554.14|8.9e-38,MatE|PF01554.14|6.9e-29,MatE|PF01554.14|6.4e+03 R_Transcript_133273:143-1603(+)
ATGACCCCAGATGTGGAAACCCCATTGATACCAGCAAACAGTGAAAAGATCTTGAATCTTAGTGATGACTCAAGAAAATTAGTGATTGTTTTAGATAAAGATGAAATCTTTAGAGAAGCCATGAAGCAGATGAGATTAGCTGGTCCTTTGATGTCAGTGAACTTCTTGCTGTTCTCATTACAGTTGGTTTCAGTTATGTTTGTTGGTCATCTAGGAGAGTTGCCTCTCTCCGGTGCTTCTATGGCCACTTCTTTAGCCTCTGTCACTGGTTTGAGCTTGATGACAGGGATGGGAAGTGCGTTGGACACATTTTGCGGCCAATCATATGGAGCAAAGCAGTACCACATGCTAGGCATACACATGCAGAGAGCGATGCTTGTTCTTCTCCTATCCAGCATTCCGCTAGCATTCATCTGGGCAAACACGGGTCATATTCTTGCATTCGTAGGACAAGATCCGGAAATAGCAGCTGAAGCAGGGGTGTATGCTCGGTACTTGATTCCGAGCATATTTGCATACGGTCTCCTCCAATGTCATATCAAATTCCTTCAAGCACAAAACATTGTAATCCCTATGATGGTAACTGCTGGATTCACGACTCTGCTGCATATAGTTATTTGTTGGGTCTTGGTGTTTGAGTGCGGATTAGGGACGAGAGGGGCTGCCGTTTCAACTGCCATCTCTTATTGGGTCAATCTTTTGTTGTTGGCTATATATGTAAGGCTGTCTCCTTCTTGCAGAGAAACTTGGACAGGTTTCTCAATGGAGGCCTTCCATGAGATCCCAGCGTTTCTTAAACTTGCTATCCCTTCTGCTATAATGATATGCTTGGAAATATGGTCGTTTGAGATGACGGTTCTATTAGCTGGACTTCTACCAAATCCAAAGGTTGAAGCATCTGTTCTATCAATCAGCCTTAATACCTGTTCAATGATATACATGATGCCACTTGGTTTAGGAGCAGCAGTAAGCACCCGAGTTTCCAATGAGCTTGGCGCTGGTCGACCACAGATAGCTCGCCTGGCAGCACGTGTTTCCCTGTTGATGGTTGGTATGGAAGGGATTACAACGGGCTGTATATTGGTATTGGGGCACAATTATTGGGGTTACTGCTACAGCAAAGATGAAGAGATAGTGAAACATGTTGGGCAAATGTTACTTCTACTTGCTTGTTCACATGTGTTTGAGGGCATTCAGACTGTGCTTTCCGGCACTGCTAGAGGATGTGGTTGGCAAAAGATCGGAGCAATAGTCAATCTGGGAGCTTATTACTTGGTAGGGATTCCATGTGCTTTCGTGCTAGCGTTTGTGTGTCACATTGGAGGAAAGGGATTGTGGATGGGAATTATAGCAGCCTTAGTAGTCCAATCATTCTGTCTCTTTATCATAGTTCTGCGCACTGATTGGGATCAACAAGTAGACAATGCCACAGATAGGGTGCACCATGTGATAATCTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_133273.p1 GENE.R_Transcript_133273~~R_Transcript_133273.p1 ORF type:complete len:487 (+),score=55.02,MatE|PF01554.14|8.9e-38,MatE|PF01554.14|6.9e-29,MatE|PF01554.14|6.4e+03 R_Transcript_133273:143-1603(+)
MTPDVETPLIPANSEKILNLSDDSRKLVIVLDKDEIFREAMKQMRLAGPLMSVNFLLFSLQLVSVMFVGHLGELPLSGASMATSLASVTGLSLMTGMGSALDTFCGQSYGAKQYHMLGIHMQRAMLVLLLSSIPLAFIWANTGHILAFVGQDPEIAAEAGVYARYLIPSIFAYGLLQCHIKFLQAQNIVIPMMVTAGFTTLLHIVICWVLVFECGLGTRGAAVSTAISYWVNLLLLAIYVRLSPSCRETWTGFSMEAFHEIPAFLKLAIPSAIMICLEIWSFEMTVLLAGLLPNPKVEASVLSISLNTCSMIYMMPLGLGAAVSTRVSNELGAGRPQIARLAARVSLLMVGMEGITTGCILVLGHNYWGYCYSKDEEIVKHVGQMLLLLACSHVFEGIQTVLSGTARGCGWQKIGAIVNLGAYYLVGIPCAFVLAFVCHIGGKGLWMGIIAALVVQSFCLFIIVLRTDWDQQVDNATDRVHHVIIY*

Click here to download the sequence:
Link to NCBI Protein BLAST