Transcript Information: R_Transcript_133328.p1


Annotated TAIR IDAT1G60000.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22093678-22094540 | Reverse length=258
E-Value9.5E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2437194529056
Replicate 21.3951030176942
Replicate 30.5327148278175
Condition 2: 8 Hour
Replicate 11.2202258279358
Replicate 22.5258138956821
Replicate 32.4724785230427
Condition 3: 24 Hour
Replicate 11.1440767721447
Replicate 20.21981985605227
Replicate 31.0907494030015


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_133328.p1 GENE.R_Transcript_133328~~R_Transcript_133328.p1 ORF type:complete len:301 (+),score=68.73,RRM_1|PF00076.18|1.4e-13,RRM_1|PF00076.18|7.7e-22,RRM_6|PF14259.2|2e-10,RRM_6|PF14259.2|9.3e-13,RRM_5|PF13893.2|0.00014,RRM_5|PF13893.2|2.3e-07 R_Transcript_133328:288-1190(+)
ATGGCGGCCACCGCAACGGCCACCATGGGCTCCTCTTTCTCGACTGCCAATTACACCTCCAGATCATACCCATCATCAACCAATAATAAGCTCTTATCAATACCAGAACCCCTCCTTGTCAAATTTGGATATGCTACTAAAACACCACATTCTCCTTTGGTATCTCATTCTCAACTGTATTATGGGACTGAACCACTTTCCATTGGGTCCCTGCCTCACATGTGGCGGGCCCCGTTGAGGCTAGCTGCCGTCATGGTGGCCTCAGAAGAGGCCGTGGTAAAGGGCACCACAGAGGAAGCAGAAGTAGAGGAGGAGTTAACACAGGTGGAGGCTGAAAATGGTGACAATGATCAGATTCAGGGTGAGGTTCCTGCAGTGAACACTAAGCTTTACTTTGGCAATTTGCCATATCATTGTGATAGTGCCCAACTTGCTGGTATTGTCCAGCAGTATGGCACTCCAGAATTGGTTGAGGTTCTTTATGACAGAGACACAGGAAGAAGCAGAGGATTTGCATTCGTGACGATGAGCTGTGTTGAGGATTGTAATGCAGTTATTGAGAATCTTGATGGAAGTGAATATGGTGGCAGATTCTTGAGAGTGAATTTCTCAGACATGCCCAAGAAAAGAGAGCCATTATACCCAGAAACTGAGCACAAGCTTTTTGTGGGCAACTTGTCCTGGTCAGTCACTTCAGAGAGCTTGTACCAAGCATTCCAAGAGTATGGCAATGTGGTTGGAGCTCGGGTTTTGTATGATGGTGAGACAGGAAAATCTCGAGGCTACGGATTTGTGTGCTACTCCACCAGATCAGAGATGGAAAATGCTCTTGCTTCTCTTAATGGAGTGGAATTAGAAGGGCGAGCAATCCGAGTCAGCTTGGCCGAAGGGAAGAAGACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_133328.p1 GENE.R_Transcript_133328~~R_Transcript_133328.p1 ORF type:complete len:301 (+),score=68.73,RRM_1|PF00076.18|1.4e-13,RRM_1|PF00076.18|7.7e-22,RRM_6|PF14259.2|2e-10,RRM_6|PF14259.2|9.3e-13,RRM_5|PF13893.2|0.00014,RRM_5|PF13893.2|2.3e-07 R_Transcript_133328:288-1190(+)
MAATATATMGSSFSTANYTSRSYPSSTNNKLLSIPEPLLVKFGYATKTPHSPLVSHSQLYYGTEPLSIGSLPHMWRAPLRLAAVMVASEEAVVKGTTEEAEVEEELTQVEAENGDNDQIQGEVPAVNTKLYFGNLPYHCDSAQLAGIVQQYGTPELVEVLYDRDTGRSRGFAFVTMSCVEDCNAVIENLDGSEYGGRFLRVNFSDMPKKREPLYPETEHKLFVGNLSWSVTSESLYQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTRSEMENALASLNGVELEGRAIRVSLAEGKKT*

Click here to download the sequence:
Link to NCBI Protein BLAST