Transcript Information: R_Transcript_133329.p1


Annotated TAIR IDAT1G60000.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22093678-22094540 | Reverse length=258
E-Value9.5E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8801484954799
Replicate 23.2410396615762
Replicate 36.6106692391581
Condition 2: 8 Hour
Replicate 13.8618646057736
Replicate 24.3521179422442
Replicate 31.6446090159411
Condition 3: 24 Hour
Replicate 12.9275056196401
Replicate 21.406207781614
Replicate 31.6158708158112


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_133329.p1 GENE.R_Transcript_133329~~R_Transcript_133329.p1 ORF type:complete len:298 (+),score=67.12,RRM_1|PF00076.18|1.4e-13,RRM_1|PF00076.18|7.6e-22,RRM_6|PF14259.2|2e-10,RRM_6|PF14259.2|9.2e-13,RRM_5|PF13893.2|4.7e+03,RRM_5|PF13893.2|0.00014,RRM_5|PF13893.2|2.3e-07 R_Transcript_133329:288-1181(+)
ATGGCGACCACCATCGGCTCCTCTTTCTCGACTGCCAAACACACCTTTAGATCATACCCATCCTCAACCAATAATAAGCTCTTATCAATACCAGAACCCCTCCTTGTCAAATTTGGATATGCTACTAAAACACCACAGTCTCCTCTGGTATCTCATTCTCAACTTTATTATGGGACTGAACCACTTTCCATTGGGTCCCTGCCCCATATGTGGCGGGCCCCCTTGAGGCTAGCCGCCGCCATGGTGGCCTCGGAAGAGGCCGTGGAAAAGGGGACCACAGAAGAAGCACAAGTAGACGAGGAGTCAGCACAGATGGAGGCTGAAAATGGTGACAATAATCAGATTCAGGGTGATCAGCTTCCTGCAGTGAACACTAAGCTTTACTTTGGCAATTTGCCATATCATTGTGATAGTGCCCAACTTGCTGGTATTGTCCAGCAGTATGGCACTCCAGAATTGGTTGAGGTTCTTTATGACAGAGACACAGGAAGAAGCAGAGGATTTGCATTCGTGACGATGAGCTGTGTTGAGGATTGTAATGCAGTTATTGAGAATCTTGATGGAAGTGAATATGGTGGCAGATTCTTGAGAGTGAATTTCTCAGACATGCCCAAGAAAAGAGAGCCATTATACCCAGAAACTGAGCACAAGCTTTTTGTGGGCAACTTGTCCTGGTCAGTCACTTCAGAGAGCTTGTACCAAGCATTCCAAGAGTATGGCAATGTGGTTGGAGCTCGGGTTTTGTATGATGGTGAGACAGGAAAATCTCGAGGCTACGGATTTGTGTGCTACTCCACCAGATCAGAGATGGAAAATGCTCTTGCTTCTCTTAATGGAGTGGAATTAGAAGGGCGAGCAATCCGAGTCAGCTTGGCCGAAGGGAAGAAGACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_133329.p1 GENE.R_Transcript_133329~~R_Transcript_133329.p1 ORF type:complete len:298 (+),score=67.12,RRM_1|PF00076.18|1.4e-13,RRM_1|PF00076.18|7.6e-22,RRM_6|PF14259.2|2e-10,RRM_6|PF14259.2|9.2e-13,RRM_5|PF13893.2|4.7e+03,RRM_5|PF13893.2|0.00014,RRM_5|PF13893.2|2.3e-07 R_Transcript_133329:288-1181(+)
MATTIGSSFSTAKHTFRSYPSSTNNKLLSIPEPLLVKFGYATKTPQSPLVSHSQLYYGTEPLSIGSLPHMWRAPLRLAAAMVASEEAVEKGTTEEAQVDEESAQMEAENGDNNQIQGDQLPAVNTKLYFGNLPYHCDSAQLAGIVQQYGTPELVEVLYDRDTGRSRGFAFVTMSCVEDCNAVIENLDGSEYGGRFLRVNFSDMPKKREPLYPETEHKLFVGNLSWSVTSESLYQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTRSEMENALASLNGVELEGRAIRVSLAEGKKT*

Click here to download the sequence:
Link to NCBI Protein BLAST