Transcript Information: R_Transcript_133627.p1


Annotated TAIR IDAT5G47020.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19082005-19089800 | Forward length=1421
E-Value6E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57640929330691
Replicate 20.3978246394667
Replicate 30.96449421457484
Condition 2: 8 Hour
Replicate 10.10309837872524
Replicate 20.47075540718285
Replicate 30.11464175128666
Condition 3: 24 Hour
Replicate 10.24166112871268
Replicate 20.69648185970244
Replicate 30.41471440459384


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_133627.p1 GENE.R_Transcript_133627~~R_Transcript_133627.p1 ORF type:complete len:475 (+),score=114.97 R_Transcript_133627:237-1661(+)
ATGCGAATGCCTCCTGCGCTCCCTCATTGGTATCTTCATTGCCATCTTTTCTTGGTGCAGCTTTTGCTACTGGTGTTTAGTGGTGTTTGTGGCGAGTACACAAGTGGGGAAAATGGCACAGAAGTTAGGTTTGGTGATAAAGCTGGGCAACTTCCTAGTGACATTTCTTCTGAAAGCAGAATTTTTAGATATGAGGACATTTCAGTATATATCTCCTCATCAGTAAACTGGGTGTCCTGTGAGGACCTTGCGGGTGTTGGATCATTCAATACTACATGCCTTATCAATTCAAATTTACGTTTGAATTCTAGTATTTATGCACTTGGTATAGGGAACTTAGAGATACGTCCTCATGTTTCAATTGTTTGCCCCGTAGAAGGTTGCTCTATCAGCTTTGATGTATCTGGGAATGTGAAAGTGGGACCACATGCTTCTATCATTGCTGGTTCTGTTGTTATTGCTTCCCATAGCTTGAGTGTGGGGCATAATGCTTCTATAAATACCACATCTCTTGGAGGAAGCCCGCCTTCACAAACTAGTGGCACTCCTGTTGGCTATGATGGAGCTGGTGGAGGACATGGAGGCAGGGGTGCCTCTTGCTTGATAAAGGAGAAACCAAATACTTGGGGTGGGGATGTCTACTCATGGTCAACTTTGTCTGAGCCTGAGAGCTATGGGAGCAGGGGAAGTGGTAAGTCTGCCCTAAATCCTTTTGGAGGAAATGGTGGGGGACGTATAAAGCTTGTAGCAAAAGAAGAACTGTACTTGAATGGTTCTGTAACTGCTGAGGGCGGTGATGGAGGTACTGATGGGGGAGGAGGCTCTGGTGGGAGTATCATCATAGATGCGTATAAGCTGAAAGGTTTTGGTGCTATCAGTGCAGCTGGTGGCAGAGGATGGGCAGGAGGTGGAGGTGGAAGAATATCACTGAAGTGTTACAGCATACAGGATGTTAAGGTCACTGTGCATGGTGGTTCAAGTATTGGCTGTCCGGAGAATGGTGGAGCTGCAGGAACTTATTTTGATGCAACTCTTCTCAGTTTAAGAGTTAGCAATGACAATTTTAGCACAGAAACAGAAACTCCTTTGCTGGATTTTTCTACTAGCCCGCTGTGGTCCAAAGTCTATATTGAGAGCAAGGCGAAGGCTTTGGTTCCTCTCCTTTGGACAAGAGTGCAGTTAAGAGGCCAAATGAGTATACTAAGCGGGAGTAGTGTCAACTTTGGGCTGAAGGAATACCCAATCTCAGAATTTGAGCTTGTTGCAGAAGAACTTCTCATGAGTGACTCCATAATGAAGGTTTTGGCTCATGATGCTGTATCATCATCAAGGAGTGGAACTTACCAGACTTTTGCAGCTGTGATCTTGCATGCTCTTTGCCTGTGGTTCATCAACCCATCATGGAGTATGGTTTTATGTAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_133627.p1 GENE.R_Transcript_133627~~R_Transcript_133627.p1 ORF type:complete len:475 (+),score=114.97 R_Transcript_133627:237-1661(+)
MRMPPALPHWYLHCHLFLVQLLLLVFSGVCGEYTSGENGTEVRFGDKAGQLPSDISSESRIFRYEDISVYISSSVNWVSCEDLAGVGSFNTTCLINSNLRLNSSIYALGIGNLEIRPHVSIVCPVEGCSISFDVSGNVKVGPHASIIAGSVVIASHSLSVGHNASINTTSLGGSPPSQTSGTPVGYDGAGGGHGGRGASCLIKEKPNTWGGDVYSWSTLSEPESYGSRGSGKSALNPFGGNGGGRIKLVAKEELYLNGSVTAEGGDGGTDGGGGSGGSIIIDAYKLKGFGAISAAGGRGWAGGGGGRISLKCYSIQDVKVTVHGGSSIGCPENGGAAGTYFDATLLSLRVSNDNFSTETETPLLDFSTSPLWSKVYIESKAKALVPLLWTRVQLRGQMSILSGSSVNFGLKEYPISEFELVAEELLMSDSIMKVLAHDAVSSSRSGTYQTFAAVILHALCLWFINPSWSMVLCS*

Click here to download the sequence:
Link to NCBI Protein BLAST