Transcript Information: R_Transcript_133630.p1


Annotated TAIR IDAT5G47020.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19082005-19089800 | Forward length=1421
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7675983509099
Replicate 21.4535900288206
Replicate 31.8795271873766
Condition 2: 8 Hour
Replicate 11.9149202074128
Replicate 21.3473864699176
Replicate 32.8856406627282
Condition 3: 24 Hour
Replicate 13.5319703427237
Replicate 22.4600096454875
Replicate 33.9285623796995


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_133630.p1 GENE.R_Transcript_133630~~R_Transcript_133630.p1 ORF type:3prime_partial len:780 (+),score=197.00 R_Transcript_133630:237-2573(+)
ATGCGAATGCCTCCTGCGCTCCCTCATTGGTATCTTCATTGCCATCTTTTCTTGGTGCAGCTTTTGCTACTGGTGTTTAGTGGTGTTTGTGGCGAGTACACAAGTGGGGAAAATGGCACAGAAGTTAGGTTTGGTGATAAAGCTGGGCAACTTCCTAGTGACATTTCTTCTGAAAGCAGAATTTTTAGATATGAGGACATTTCAGTATATATCTCCTCATCAGTAAACTGGGTGTCCTGTGAGGACCTTGCGGGTGTTGGATCATTCAATACTACATGCCTTATCAATTCAAATTTACGTTTGAATTCTAGTATTTATGCACTTGGTATAGGGAACTTAGAGATACGTCCTCATGTTTCAATTGTTTGCCCCGTAGAAGGTTGCTCTATCAGCTTTGATGTATCTGGGAATGTGAAAGTGGGACCACATGCTTCTATCATTGCTGGTTCTGTTGTTATTGCTTCCCATAGCTTGAGTGTGGGGCATAATGCTTCTATAAATACCACATCTCTTGGAGGAAGCCCGCCTTCACAAACTAGTGGCACTCCTGTTGGCTATGATGGAGCTGGTGGAGGACATGGAGGCAGGGGTGCCTCTTGCTTGATAAAGGAGAAACCAAATACTTGGGGTGGGGATGTCTACTCATGGTCAACTTTGTCTGAGCCTGAGAGCTATGGGAGCAGGGGAAGTGGTAAGTCTGCCCTAAATCCTTTTGGAGGAAATGGTGGGGGACGTATAAAGCTTGTAGCAAAAGAAGAACTGTACTTGAATGGTTCTGTAACTGCTGAGGGCGGTGATGGAGGTACTGATGGGGGAGGAGGCTCTGGTGGGAGTATCATCATAGATGCGTATAAGCTGAAAGGTTTTGGTGCTATCAGTGCAGCTGGTGGCAGAGGATGGGCAGGAGGTGGAGGTGGAAGAATATCACTGAAGTGTTACAGCATACAGGATGTTAAGGTCACTGTGCATGGTGGTTCAAGTATTGGCTGTCCGGAGAATGGTGGAGCTGCAGGAACTTATTTTGATGCAACTCTTCTCAGTTTAAGAGTTAGCAATGACAATTTTAGCACAGAAACAGAAACTCCTTTGCTGGATTTTTCTACTAGCCCGCTGTGGTCCAAAGTCTATATTGAGAGCAAGGCGAAGGCTTTGGTTCCTCTCCTTTGGACAAGAGTGCAGTTAAGAGGCCAAATGAGTATACTAAGCGGGAGTAGTGTCAACTTTGGGCTGAAGGAATACCCAATCTCAGAATTTGAGCTTGTTGCAGAAGAACTTCTCATGAGTGACTCCATAATGAAGGTTTATGGTGCATTACGTGTGATTGTAAAGATGTTACTGATGTGGAATTCTGAAATCCAAATTGATGGTGGGAATGCTGTTGTATCAACTTCTGTACTTGAAGTGAGAAATCTTGCTGTTTTGCGGGAACATTCGGCATTAAGTTCAAATACAAATTTAGCTTTATATGGTCAGGGACTGCTGAGGTTGACTGGTGATGGCGACTCAATTAAAAGTCAGCGGCTTTTGCTCTCACAGTTTTACAACATCACTGTTGGTCCTGGCTCATTACTTCAGGCACCTTTGGACGATGATGCTAGCAAATTCAAGGTGACCAAATCTCATTGTGAGAGCCAGAAATGCCCAATGGATTTGATAACTCCACCAGATGATTGTCATGTTAACAGTACCATTTCCTTTTCACTCAAAATTTGCCGAGTCGAAGATATTCTTGTCAGTGGTATTGTCAAAGGGAGTATAATCCACTTTCACAGAGCAAGGACCATAGTTGTCAGTGGCAGTGGAATCCTGACTGCATCGGAGCTGGGTTGCAGAAAAGGTATTGGTTCAGCCAGATACTCGAATGGAGCTGGTGGTGGTGCTGGGCATGGAGGCAAGGGAGGTCCAGGGATGTTTAATGGGACAGTAAGTGAAGGAGGGGGTAAATATGGAAATGCCCATCTTCCTTGTGAACTGGGTAGTGGATCTGAGGGCCCAAATGAGTCATATGGACATGTGGCTGGTGGTGGAATGATAGTGATAGGTGCAATGCAGTGGCCCCTATGGAGGTTGGATTTACATGGATCTTTGAGGGCCGATGGTCAAAGATATGGTAAAGTGGCAAAAAGTACCAGTGGCACTTTGATTGGAGGTCTTGGTGGGGGCTCTGGTGGGACTGTTCTTGTTTTTCTGCAAAAGCTCATACTTGCGGAGGATTCCAACTTATCTGTTGTTGGTGGAAGAGGTGGTCCTCTGGGTGGTGGTGGTGGTGGTGGTGGACGAATTCATTTTCATTGGTCTGATATAAATACTGGAGATGAATATGTTCCAATTGCCACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_133630.p1 GENE.R_Transcript_133630~~R_Transcript_133630.p1 ORF type:3prime_partial len:780 (+),score=197.00 R_Transcript_133630:237-2573(+)
MRMPPALPHWYLHCHLFLVQLLLLVFSGVCGEYTSGENGTEVRFGDKAGQLPSDISSESRIFRYEDISVYISSSVNWVSCEDLAGVGSFNTTCLINSNLRLNSSIYALGIGNLEIRPHVSIVCPVEGCSISFDVSGNVKVGPHASIIAGSVVIASHSLSVGHNASINTTSLGGSPPSQTSGTPVGYDGAGGGHGGRGASCLIKEKPNTWGGDVYSWSTLSEPESYGSRGSGKSALNPFGGNGGGRIKLVAKEELYLNGSVTAEGGDGGTDGGGGSGGSIIIDAYKLKGFGAISAAGGRGWAGGGGGRISLKCYSIQDVKVTVHGGSSIGCPENGGAAGTYFDATLLSLRVSNDNFSTETETPLLDFSTSPLWSKVYIESKAKALVPLLWTRVQLRGQMSILSGSSVNFGLKEYPISEFELVAEELLMSDSIMKVYGALRVIVKMLLMWNSEIQIDGGNAVVSTSVLEVRNLAVLREHSALSSNTNLALYGQGLLRLTGDGDSIKSQRLLLSQFYNITVGPGSLLQAPLDDDASKFKVTKSHCESQKCPMDLITPPDDCHVNSTISFSLKICRVEDILVSGIVKGSIIHFHRARTIVVSGSGILTASELGCRKGIGSARYSNGAGGGAGHGGKGGPGMFNGTVSEGGGKYGNAHLPCELGSGSEGPNESYGHVAGGGMIVIGAMQWPLWRLDLHGSLRADGQRYGKVAKSTSGTLIGGLGGGSGGTVLVFLQKLILAEDSNLSVVGGRGGPLGGGGGGGGRIHFHWSDINTGDEYVPIAT

Click here to download the sequence:
Link to NCBI Protein BLAST