Transcript Information: R_Transcript_133732.p1


Annotated TAIR IDAT5G53080.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21520624-21523158 | Forward length=564
E-Value4E-147
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2235122076121
Replicate 27.6390795131638
Replicate 36.9694967579783
Condition 2: 8 Hour
Replicate 16.4080029542791
Replicate 27.7549441279005
Replicate 36.0247899080433
Condition 3: 24 Hour
Replicate 17.1804205584521
Replicate 25.2557212675418
Replicate 38.3825251992373


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_133732.p1 GENE.R_Transcript_133732~~R_Transcript_133732.p1 ORF type:complete len:470 (+),score=102.59,TPR_12|PF13424.2|1e-10,TPR_12|PF13424.2|6e-11,TPR_12|PF13424.2|1.8e-08,TPR_12|PF13424.2|0.00025,TPR_12|PF13424.2|3.4,TPR_10|PF13374.2|0.091,TPR_10|PF13374.2|0.18,TPR_10|PF13374.2|0.0049,TPR_10|PF13374.2|0.012,TPR_10|PF13374.2|9.5e-05,TPR_10|PF13374.2|0.0068,TPR_10|PF13374.2|3.1e-06,TPR_10|PF13374.2|3.3e+02,TPR_1|PF00515.24|0.001,TPR_1|PF00515.24|80,TPR_1|PF00515.24|0.17,TPR_1|PF00515.24|0.00033,TPR_1|PF00515.24|1.3e+03,TPR_1|PF00515.24|1.6e+02,TPR_7|PF13176.2|6.2e+03,TPR_7|PF13176.2|0.11,TPR_7|PF13176.2|9.1,TPR_7|PF13176.2|30,TPR_7|PF13176.2|0.00016,TPR_7|PF13176.2|3.7e+02,TPR_7|PF13176.2|1e+02,TPR_7|PF13176.2|1.3e+03,TPR_11|PF13414.2|0.016,TPR_11|PF13414.2|0.014,TPR_11|PF13414.2|9.5e-05,TPR_11|PF13414.2|1.1e+02,TPR_11|PF13414.2|13,TPR_2|PF07719.13|0.17,TPR_2|PF07719.13|2.7e+02,TPR_2|PF07719.13|10,TPR_2|PF07719.13|0.018,TPR_2|PF07719.13|6.3e+03,TPR_2|PF07719.13|3.2e+03,TPR_2|PF07719.13|45,TPR_14|PF13428.2|9.4,TPR_14|PF13428.2|1.5e+02,TPR_14|PF13428.2|59,TPR_14|PF13428.2|0.091,TPR_14|PF13428.2|4.9e+02,TPR_14|PF13428.2|2.3e+03,TPR_14|PF13428.2|2.1e+02,TPR_14|PF13428.2|2.4e+02,TPR_8|PF13181.2|0.08,TPR_8|PF13181.2|6.3,TPR_8|PF13181.2|24,TPR_8|PF13181.2|15,TPR_8|PF13181.2|1.2e+04,TPR_8|PF13181.2|1.1e+03,TPR_5|PF12688.3|2.5e+02,TPR_5|PF12688.3|4.5e+02,TPR_5|PF12688.3|4.3e+02,TPR_5|PF12688.3|0.00016,TPR_5|PF12688.3|1.1e+02,TPR_5|PF12688.3|1.6e+02,TPR_6|PF13174.2|5.3e+03,TPR_6|PF13174.2|34,TPR_6|PF13174.2|1.4,TPR_6|PF13174.2|2.2e+02,TPR_6|PF13174.2|9.8,TPR_6|PF13174.2|2.1e+03,TPR_17|PF13431.2|1.2e+04,TPR_17|PF13431.2|11,TPR_17|PF13431.2|58,TPR_17|PF13431.2|30,TPR_17|PF13431.2|5,TPR_19|PF14559.2|1e+02,TPR_19|PF14559.2|11,TPR_19|PF14559.2|0.2,TPR_19|PF14559.2|82 R_Transcript_133732:337-1746(+)
ATGCCAAAATGGGGAATGGCATTGGCTATAGTGTTCCGTCTCCAGCGGACAACCAAAGGGAAGAAAAACGATGCCATAGATTTACTTGAAGCAAATTATCAAGCAGTAAAAGAGCAGTTAGACGCAGGATTTTCAGGCATTGAAGAAGCTGCTATACTCGATATTATTGCTCTGGGCTATGTAGCTGTTGGTGACGTTAAGATGGTTGGATCTGTAATAGATTTGATGAGCAAAATTGTTGATAATTTGGACGATGGAGAAATGGTTCTGGACTCAGTACTCATGCACATGGGAAGCATGTATGCATCACTGGGAAAATTTGAGAAATCCATGCTCATGTATCAGAGGGCCCTCAGAATACTTGAAAACTTTTATGGTGAAAATGGAATATTTCTTGTGACACCATTGTTGGGTTTAGCAAAAGTTTTTGGTTCAACTGGAAGAGCTGTTGAAGCAGTAGAAATTTACCAACGTGTGATTACCATCATGGAGACAAGCCATGGCGCTGATAGTGCTGATCTTGTGTTACCTTTATCTAGCCTTGGCCATATCCTACTCAGTCAAGGAAAAACTGATGAAGCGGAATATCCTTTCAGAAGGATTTTGAATCTGTACTCAAGTTTACATGGAGAAACTGATGGAAGAGTTGGCATGGCTCTTTGTTCCCTAGCCCATGTGAAATGTGCTCAGGGGAATTCAGATGAAGCCATTGACTTATACAGAAGAGCTCTTCAGGTTATTAAGGATTCGGGCTACATGGGATTGGATGACAACATTATGGAGAAGATGAGGATAGATCTGGCAGAATTACTTCACATAGTTGGAAGAGGAAATGAAGGACGGGAACTATTGGAAGAGTGCTTGGTGATCACTGAGAAGTATAAAGGGAAGGATCATCCTAGCCTAGCTACCCACTTTATAAACCTTGCAACCTCTTATTCATTCTCAAAAAATAATGTCGAAGCAGAGCGTTTGCTCAGGATGTCTTTGCGGGTGATGGTGAAGTCTGTGGGTCCTGATGATCCATCTAACACCTTTCCTATGTTGCAACTTGCAGTTACTCTATTTAACTTAAAACGGGATAAAGAAGCAGAGAGGCTTGCTATTGAAGTTCTGCAAATCCGTGAGGCAGCATTTGGAAAAGAATCCCTTCCAGTTGGGGAGGCACTTGACTGTCTGGTGTCAATACAGACAAGATTAGGGGAGGACAACGCAAAGTTACTCGAGCTTCTCAAAAGGGTGCTCGGAATTCAAGAGAAAGAGTTTGGTTATGAGAGCGAGGAAGTGATGCTAACCTTGAAAAAAATCCTATTCTACATGGATAAATTAGGGAGGAAGCAAGAGAAGTTTCCAATTCAGAGAAGATTATCTGTGCTGAGGGGAAAGTACAGAAATAGGGTACAATATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_133732.p1 GENE.R_Transcript_133732~~R_Transcript_133732.p1 ORF type:complete len:470 (+),score=102.59,TPR_12|PF13424.2|1e-10,TPR_12|PF13424.2|6e-11,TPR_12|PF13424.2|1.8e-08,TPR_12|PF13424.2|0.00025,TPR_12|PF13424.2|3.4,TPR_10|PF13374.2|0.091,TPR_10|PF13374.2|0.18,TPR_10|PF13374.2|0.0049,TPR_10|PF13374.2|0.012,TPR_10|PF13374.2|9.5e-05,TPR_10|PF13374.2|0.0068,TPR_10|PF13374.2|3.1e-06,TPR_10|PF13374.2|3.3e+02,TPR_1|PF00515.24|0.001,TPR_1|PF00515.24|80,TPR_1|PF00515.24|0.17,TPR_1|PF00515.24|0.00033,TPR_1|PF00515.24|1.3e+03,TPR_1|PF00515.24|1.6e+02,TPR_7|PF13176.2|6.2e+03,TPR_7|PF13176.2|0.11,TPR_7|PF13176.2|9.1,TPR_7|PF13176.2|30,TPR_7|PF13176.2|0.00016,TPR_7|PF13176.2|3.7e+02,TPR_7|PF13176.2|1e+02,TPR_7|PF13176.2|1.3e+03,TPR_11|PF13414.2|0.016,TPR_11|PF13414.2|0.014,TPR_11|PF13414.2|9.5e-05,TPR_11|PF13414.2|1.1e+02,TPR_11|PF13414.2|13,TPR_2|PF07719.13|0.17,TPR_2|PF07719.13|2.7e+02,TPR_2|PF07719.13|10,TPR_2|PF07719.13|0.018,TPR_2|PF07719.13|6.3e+03,TPR_2|PF07719.13|3.2e+03,TPR_2|PF07719.13|45,TPR_14|PF13428.2|9.4,TPR_14|PF13428.2|1.5e+02,TPR_14|PF13428.2|59,TPR_14|PF13428.2|0.091,TPR_14|PF13428.2|4.9e+02,TPR_14|PF13428.2|2.3e+03,TPR_14|PF13428.2|2.1e+02,TPR_14|PF13428.2|2.4e+02,TPR_8|PF13181.2|0.08,TPR_8|PF13181.2|6.3,TPR_8|PF13181.2|24,TPR_8|PF13181.2|15,TPR_8|PF13181.2|1.2e+04,TPR_8|PF13181.2|1.1e+03,TPR_5|PF12688.3|2.5e+02,TPR_5|PF12688.3|4.5e+02,TPR_5|PF12688.3|4.3e+02,TPR_5|PF12688.3|0.00016,TPR_5|PF12688.3|1.1e+02,TPR_5|PF12688.3|1.6e+02,TPR_6|PF13174.2|5.3e+03,TPR_6|PF13174.2|34,TPR_6|PF13174.2|1.4,TPR_6|PF13174.2|2.2e+02,TPR_6|PF13174.2|9.8,TPR_6|PF13174.2|2.1e+03,TPR_17|PF13431.2|1.2e+04,TPR_17|PF13431.2|11,TPR_17|PF13431.2|58,TPR_17|PF13431.2|30,TPR_17|PF13431.2|5,TPR_19|PF14559.2|1e+02,TPR_19|PF14559.2|11,TPR_19|PF14559.2|0.2,TPR_19|PF14559.2|82 R_Transcript_133732:337-1746(+)
MPKWGMALAIVFRLQRTTKGKKNDAIDLLEANYQAVKEQLDAGFSGIEEAAILDIIALGYVAVGDVKMVGSVIDLMSKIVDNLDDGEMVLDSVLMHMGSMYASLGKFEKSMLMYQRALRILENFYGENGIFLVTPLLGLAKVFGSTGRAVEAVEIYQRVITIMETSHGADSADLVLPLSSLGHILLSQGKTDEAEYPFRRILNLYSSLHGETDGRVGMALCSLAHVKCAQGNSDEAIDLYRRALQVIKDSGYMGLDDNIMEKMRIDLAELLHIVGRGNEGRELLEECLVITEKYKGKDHPSLATHFINLATSYSFSKNNVEAERLLRMSLRVMVKSVGPDDPSNTFPMLQLAVTLFNLKRDKEAERLAIEVLQIREAAFGKESLPVGEALDCLVSIQTRLGEDNAKLLELLKRVLGIQEKEFGYESEEVMLTLKKILFYMDKLGRKQEKFPIQRRLSVLRGKYRNRVQY*

Click here to download the sequence:
Link to NCBI Protein BLAST