Transcript Information: R_Transcript_133886.p1


Annotated TAIR IDAT5G40140.1
Annotated Gene NameRING/U-box superfamily protein with ARM repeat domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16057347-16058999 | Forward length=550
E-Value2.5E-157
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.5769648884905
Replicate 26.8708186005802
Replicate 37.4541120513988
Condition 2: 8 Hour
Replicate 16.4460046661852
Replicate 27.4400009051111
Replicate 37.9309596677742
Condition 3: 24 Hour
Replicate 114.060083037077
Replicate 210.644585643715
Replicate 313.164634080419


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_133886.p1 GENE.R_Transcript_133886~~R_Transcript_133886.p1 ORF type:complete len:547 (+),score=46.63,Arm|PF00514.19|0.55,Arm|PF00514.19|0.00017,Arm|PF00514.19|1.2,Arm|PF00514.19|7.3e+02,Arm|PF00514.19|0.4,Arm|PF00514.19|1.3e+04,U-box|PF04564.11|4.8e-10 R_Transcript_133886:219-1859(+)
ATGAGATTGAAACAACAACAAGAAGAATATCATCAAAAAGCAAAGATGGGCACTCACCGCTGGAAGATCTCAATCTACAGATCCAACTCCACACCCACAACCAAACCCCAACCCGAACCCGACCCGCCATCCGAATTCCTCTGCCCAATCTCCGCCTCACTCATGGTCGACCCGGTGATCGTCTCCACAGGCCAGACCTTCGAGCGGGCTTGCGTCACCGCCTGCAAGACACTCGGGTACACCCCGACCCTCAAAGACGGGTCCGTACCCGACTTGTCCGTCATTATCCCCAACTTGGCCCTGAAATCCTCCATCCTCAATTGGGCCTGGGCCCACTCCTCCCCCCCGCCTCGGCCCGTCGAGCTGGCCCAAGCCCTGAAGCTCGTACGAGGCTTGATGTCGAACTCAAGGGAGAAAATGTCGGGTGAGCTCACAAAGGAGATGATAAATAGTAGTCCGAATATATTGGATCATGCGGAGAGCGAGTTGACTCGGAGACAGGGGCGGTTCGACTCGAGCGAGTCGTCGTTCGGGAATGCACCGCCGTTGGCGCTGACGACTCGGCCGAGCTGCTACTCGTCTTGCTCGTCGAGTTCCGAGTTCGAGGTGGTGGCGGGTGGCGGTGGTGGCACGTGCGAGGATGAAGGATTCTTGGCGAAGTTAAGGAGCCCGCACGTGTATGAGCAGGAAGAAGGAGTGGCTGAGCTGAGGAAAGTTACAAGGAGTTGTGAAGGGTCTCGTTTGAGTTTGTCTACTCCTCGTCTTTTGTGTGCTTTGAGACTCTTAATTACGTCTAAATACTCTGACATTCAGGTGGATGCATTAGCAGCCTTGGTGAATCTATCGTTAGAAAAAACCAACAAGGTGAAGATAGTCCGGGCAGGGTTTGTGCCTCCCTTAATTGACATTTTAAGAGGGCCCAGATTCCCTGAAGCGCAGGAACACGCTTGTGGTGCACTCTTCAGCTTAGCCCTTGATGACGACAACAAAACCGCCATCGGCGTCCTCGGCGCACTACCGCAGTTGATCCACATCATGATGACATCATCATCAAACACTATCACTTGCATTACCACCGAGCGAGCCCGCCACGACGCGGCCTTGGCCTTGTACCACCTCTCACTGGTCCAGAGCAACCGGTCAAAGCTTGTCAAACTTGGGTCAGTCCAGCTTCTTCTAGGGATGGTCAAGTCGGGCCAGATGCCGGGCCGGGCTTTACTTATATTGTGTAACTTGGGGGCTTGTAATGAGGGGAGGGCTGCTATGCTGGATGCGGGTGCAGTGGAGTTCTTTGTGGAATTGCTAAGAAAGAAAGGGGACCATGATCAGCAGTTTGACTTTGATGAGTCAACGAAGGAGAGCTGTGTGGCGGCGATCTTTGCGCTTAGTCACGGTGGTTTGAGGTTCGGAGGGCTAGCGAAGGCGGCTGGTGCGGTGGAGGTTCTCCGAGATGTGGTGGAGCAAACGGGCCGTGAACGGGCTAGAGATAAGGCAAGGAGGGTTTTGGAGATGTTGAAAGCGAAGGAGGAAGAAGAGGAGGAGGATGTGGACTGGGAAAAGGTTCTTGAGTTTGGGTTTCCTACGAGTCGGTCTGTAATTCGACCCGGAAGTCAATCGTGTATGAATTCTAGTGAGTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_133886.p1 GENE.R_Transcript_133886~~R_Transcript_133886.p1 ORF type:complete len:547 (+),score=46.63,Arm|PF00514.19|0.55,Arm|PF00514.19|0.00017,Arm|PF00514.19|1.2,Arm|PF00514.19|7.3e+02,Arm|PF00514.19|0.4,Arm|PF00514.19|1.3e+04,U-box|PF04564.11|4.8e-10 R_Transcript_133886:219-1859(+)
MRLKQQQEEYHQKAKMGTHRWKISIYRSNSTPTTKPQPEPDPPSEFLCPISASLMVDPVIVSTGQTFERACVTACKTLGYTPTLKDGSVPDLSVIIPNLALKSSILNWAWAHSSPPPRPVELAQALKLVRGLMSNSREKMSGELTKEMINSSPNILDHAESELTRRQGRFDSSESSFGNAPPLALTTRPSCYSSCSSSSEFEVVAGGGGGTCEDEGFLAKLRSPHVYEQEEGVAELRKVTRSCEGSRLSLSTPRLLCALRLLITSKYSDIQVDALAALVNLSLEKTNKVKIVRAGFVPPLIDILRGPRFPEAQEHACGALFSLALDDDNKTAIGVLGALPQLIHIMMTSSSNTITCITTERARHDAALALYHLSLVQSNRSKLVKLGSVQLLLGMVKSGQMPGRALLILCNLGACNEGRAAMLDAGAVEFFVELLRKKGDHDQQFDFDESTKESCVAAIFALSHGGLRFGGLAKAAGAVEVLRDVVEQTGRERARDKARRVLEMLKAKEEEEEEDVDWEKVLEFGFPTSRSVIRPGSQSCMNSSEF*

Click here to download the sequence:
Link to NCBI Protein BLAST