Transcript Information: R_Transcript_133899.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value4E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.19588691957796
Replicate 20
Replicate 30.1452128849631
Condition 3: 24 Hour
Replicate 10.36732491564327
Replicate 20
Replicate 30.17510163749518


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_133899.p1 GENE.R_Transcript_133899~~R_Transcript_133899.p1 ORF type:5prime_partial len:125 (+),score=24.15,zf-RVT|PF13966.2|3.7e-06 R_Transcript_133899:2-376(+)
GCTGATCTTTTCTCATCTTATTTTGGTGGCGCCCCTGTGGTCCATATTCCACGACGTTTCCCACGTTGGTGCCTCTCTCCTGGAGTTTGTGTCATGTGTAGAAGAGAGAATGAGACCACTTCTCATCTCTTTTTGACTTGTGATGTGGCGCAAGGTCTATGGGGCAAGGTTATTTGGGGTGAGGGGAGAGAGTTGGGTGTGCCCACCAATTATTCCTCATCTCCTGTTGGGTCGTCATGTGGGCTTTGGGAGAGGAAAGGATCAAAGTTTGTTGTGGCGTGGTGCTATGATGGCTATGCTTTGGAGTATTTGGCTAGAGAGGAATGCAAGGATTTTCCATGGGTTGATAACCTGTCCTGCTTTTGTCTGGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_133899.p1 GENE.R_Transcript_133899~~R_Transcript_133899.p1 ORF type:5prime_partial len:125 (+),score=24.15,zf-RVT|PF13966.2|3.7e-06 R_Transcript_133899:2-376(+)
ADLFSSYFGGAPVVHIPRRFPRWCLSPGVCVMCRRENETTSHLFLTCDVAQGLWGKVIWGEGRELGVPTNYSSSPVGSSCGLWERKGSKFVVAWCYDGYALEYLAREECKDFPWVDNLSCFCLG*

Click here to download the sequence:
Link to NCBI Protein BLAST