Transcript Information: R_Transcript_13393.p1


Annotated TAIR IDAT5G57940.1
Annotated Gene Namecyclic nucleotide gated channel 5
Annotated Gene Symbol(s)ATCNGC5, CNGC5
Annotation TypeOrtholog
Chromosome Positionchr5:23457116-23460439 | Forward length=717
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 190.411158731695
Replicate 262.180240435061
Replicate 379.1810613193
Condition 2: 8 Hour
Replicate 164.565891477124
Replicate 281.631059706336
Replicate 388.411077313329
Condition 3: 24 Hour
Replicate 180.052326440481
Replicate 265.953415169347
Replicate 379.211211872389


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_13393.p1 GENE.R_Transcript_13393~~R_Transcript_13393.p1 ORF type:complete len:727 (+),score=107.58,Ion_trans|PF00520.27|1.1e-38,cNMP_binding|PF00027.25|1.6e-07 R_Transcript_13393:467-2647(+)
ATGATGTTCAATTGTGGATATGGTCAGAATGATAAATTTGTAAGGTTGGAAGAAGTGTCACTATCTCCCAATTACAATGGAGTGAACAAGGGTCGATTTGGTATTGACGGGCTGAATTGTGCTAATAGCGGAATTAATAGCCCGTCTAACTCTTTTAAGAGAGGAGTGATGAGAAGTTCTGAAGGACTTCGATCAATTGGCAGATCACTTAGATTTGGGGTTTCTAGGGCAGTGTTTCCTGAAGATCTAAAAGTGTCCGAGAAAAAGATTTTCGATCCACAGGACAAATTTCTACAGCTTTGGAACAGACTTTTCTTGGTGTCATGTATTTTGTCAGTTTTTGTGGATCCCTTTTTCTTCTATCTTCCAATTGTTGATCAAGATGTGAAATGTATTGGTATAGACAGAAAGTTGGCAATTGCAGCCACTACAGTGCGGACAATTATCGATGTTTTTTACCTTATCCGTATGGCTATCCAGTTCCGAACTGCATATATTGCTCCATCTTCTCGAGTATTTGGACGAGGTGAACTTGTTATTGATCCTGCACAGATTGCAAAGCGTTACCTACGGAGTCATTTTATCATTGATTTTCTTTCTGTGCTGCCGTTACCACAGATTGTTATCTGGAGATATCTGCAGAGATCAAAAGGATCTGATGTATTTGCTACCAAACAGGCCTTGCTTATCATAGTCTTGTTTCAATATATCCCTAGGCTTGTCAGGCTCTTACCCCTCACCTCAGAATTAAAGAGGACATCAGGTGTTTTTGCTGAAACTGCTTGGGCTGGTGCTGCTTACTATCTTCTACTCTACATGCTTTGTAGCCATGTAGTAGGGGCTTTGTGGTATCTAATAGGTGTAGAACGTAATGACACTTGTTGGCAGAAAGCTTGTAATCGTTATAAGCAGCAATGCAATAAAAATTTCTTGTATTGTTACAATCAGAACATGCAAGGCTATGATCGTTGGAAGAGTATACGTGATTCTGTTCTTGATTCAAATTGCACATCGGATGATAATGGACCATTTGACTTTGGCATTTTTCAGCAGGCTTTGCAGGCTGACATTTCCTCATCTGACAGTTTCATATCAAAATACTGTTACTGTTTGTGGTGGGGGCTACAAAACTTGAGTACATTGGGACAAGGGCTTCAAACAAGTACCTTTCCAGGAGAGGTCATATTCTCCATCGCACTGGCGATATTTGGGCTCATTCTTTTTGCACTTTTGATTGGAAACATGCAGACTTACCTGCAGTCTCTTACTATTCGACTTGAAGAGATGAGGGTCAAAAGGCGTGATTCAGAGCAGTGGATGCATCACCGCTTGCTCCCCCCGGAGTTGAGGGAACGTGTTAGACGCTATGATCAGTACAAATGGCTGGAAACACGTGGAGTTGATGAAGAGAATTTGGTTAGCAGTTTACCAAAGGATCTCAGGAGGGACATAAAACGTCATCTTTGTCTGGCATTAGTGAGGAGGGTTCCTCTGTTTGAAAATATGGATGAGAGGCTACTAGATGCTATATGTGAGCGGCTGAAGCCAAGTTTGTACACTGAAAAGACCTACATCCTACGAGAAGGTGATCCGGTTGATGAAATGCTCTTTATCATACGTGGCCGCCTCGAGAGTGAAACCACTGATGGTGGGCGGAGTGGATTTTTGAACCGCAGCTTACTAAAAGAGGGTGACTTCTGTGGAGATGAGCTTTTAACATGGGCATTGGATCCCAAGTCGGGGTCCAACCTTCCGTCTTCAACTCGAACAGTAAAAGCAATCACAGAGGTGGAGGCCTTTGCCCTAGAAGCCGAAGAGCTGAAATTTGTCGCGAGCCAATTTAGGCGTCTTCACAGTCGACAGGTTCAACACACCTTCCGATTCTACTCACAGCAATGGCGAACCTGGGCTGCTCGTTTCATCCAAGCTGCTTGGCGTCGGTATTTGAAGAGGAAAATGATGGAGCTCCGTCGGAAGGAGGAGGAGGAAGCAGAAGGAGCCAGTGAGGCCTTGAAAAACACAGGCAGTGGCGGATCATATAGCCTCGGTGCTACCCTCTTGGCGTCAAGGTTTGCTGCAAACGCTCTTCGTGGGGTCCATCGAAATCGGCTTTCCAAGGCCCAGGATTTGGTGAAACTGCCTAAACCTCCAGAGCCTGACTTTACAGCTGATGCAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_13393.p1 GENE.R_Transcript_13393~~R_Transcript_13393.p1 ORF type:complete len:727 (+),score=107.58,Ion_trans|PF00520.27|1.1e-38,cNMP_binding|PF00027.25|1.6e-07 R_Transcript_13393:467-2647(+)
MMFNCGYGQNDKFVRLEEVSLSPNYNGVNKGRFGIDGLNCANSGINSPSNSFKRGVMRSSEGLRSIGRSLRFGVSRAVFPEDLKVSEKKIFDPQDKFLQLWNRLFLVSCILSVFVDPFFFYLPIVDQDVKCIGIDRKLAIAATTVRTIIDVFYLIRMAIQFRTAYIAPSSRVFGRGELVIDPAQIAKRYLRSHFIIDFLSVLPLPQIVIWRYLQRSKGSDVFATKQALLIIVLFQYIPRLVRLLPLTSELKRTSGVFAETAWAGAAYYLLLYMLCSHVVGALWYLIGVERNDTCWQKACNRYKQQCNKNFLYCYNQNMQGYDRWKSIRDSVLDSNCTSDDNGPFDFGIFQQALQADISSSDSFISKYCYCLWWGLQNLSTLGQGLQTSTFPGEVIFSIALAIFGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPPELRERVRRYDQYKWLETRGVDEENLVSSLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPSLYTEKTYILREGDPVDEMLFIIRGRLESETTDGGRSGFLNRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKAITEVEAFALEAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAARFIQAAWRRYLKRKMMELRRKEEEEAEGASEALKNTGSGGSYSLGATLLASRFAANALRGVHRNRLSKAQDLVKLPKPPEPDFTADAD*

Click here to download the sequence:
Link to NCBI Protein BLAST