Transcript Information: R_Transcript_133942.p1


Annotated TAIR IDAT2G44850.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0565 (InterPro:IPR018881); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45380.1); Has 138 Blast hits to 138 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18498672-18500823 | Forward length=400
E-Value1.5E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.592646283151
Replicate 23.0661264099991
Replicate 34.4359079154454
Condition 2: 8 Hour
Replicate 13.9643781343159
Replicate 25.6789541183963
Replicate 34.9556778201691
Condition 3: 24 Hour
Replicate 15.6847903611458
Replicate 26.0914524554928
Replicate 33.8911474998929


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_133942.p1 GENE.R_Transcript_133942~~R_Transcript_133942.p1 ORF type:complete len:315 (+),score=58.15,UPF0565|PF10561.5|27,UPF0565|PF10561.5|2.6e-10 R_Transcript_133942:420-1364(+)
ATGGACCGTTGGACAGGTATCTTGAAAGTTCCTGTATACCCAAATGGCAATACTCTCTGTAGAGTAGCTGCATCTCTTTGCATTTCTCCTTCTTCAAAATCCCTTCTTGTGCCTACAGCTAATGCAATATTCTTTAATGGAGACAAGGTTGAAGGAACTGGTAACCCAGTTATTGAAAGATTGTCTGATTTACAAAACATAGCCAAGATTCTAGTCTCCAAATTTGGTGCTTCGATCAATGCTTGGGTTATTGAAGCTCCAATCTTTAATGGGCCTTTTGCTGTTTATAAGGAATTTCTTCCTTCTCTTAGTAATTGGGGTGAACCCCATTCTTATAAACATGATGGGTTTCCTGCATCAACTTCTGTTGTTTCACTTCTTTCAAGTTTTCTTCATGAGAGAGCGAAAAATTCTACCCAGGAGGAACATCACCACCCTACACCATCTGTATCCACTTGTTTCCCCAGAACTTTTATACTCGGTTTTAGCAAGGTTGGTGTAGTGCTGAATCAGTTAGTCAGTGAGCTTGGCTTTGTGGACATAACACGCATGGAGGATCCAGCACAAGCTGACCTGCAGAACCAGATTATACCCGGGTCAAGAGAGAGCTTCTTGGGCAGCATAACTGAGATTCACTATGTCGATGTTGGGTTGAATACCCCTGGTGCTTACCTCACTGACCATAATGTTATCGAGAGAATAGCTGGCCGGCTGATACAGAGGGATGGTGACTTGTGTTTCATGCTTCACGGGACCCCAAGGCAGTGGAACGACAAGCGGCGGGCCTGGATACGTGATGAAAAGGACCAGTTCCGTCAATTGCTTGAAGCCGAAAGGCAGAAGAGTATGGGGAAGCTCCAAGTCTATGAGAGAGTATATTTTGCTGATAAGACTCCTGATATGCAGATGCATTTTGGCATAATCGAAGAATTTCTTATACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_133942.p1 GENE.R_Transcript_133942~~R_Transcript_133942.p1 ORF type:complete len:315 (+),score=58.15,UPF0565|PF10561.5|27,UPF0565|PF10561.5|2.6e-10 R_Transcript_133942:420-1364(+)
MDRWTGILKVPVYPNGNTLCRVAASLCISPSSKSLLVPTANAIFFNGDKVEGTGNPVIERLSDLQNIAKILVSKFGASINAWVIEAPIFNGPFAVYKEFLPSLSNWGEPHSYKHDGFPASTSVVSLLSSFLHERAKNSTQEEHHHPTPSVSTCFPRTFILGFSKVGVVLNQLVSELGFVDITRMEDPAQADLQNQIIPGSRESFLGSITEIHYVDVGLNTPGAYLTDHNVIERIAGRLIQRDGDLCFMLHGTPRQWNDKRRAWIRDEKDQFRQLLEAERQKSMGKLQVYERVYFADKTPDMQMHFGIIEEFLIH*

Click here to download the sequence:
Link to NCBI Protein BLAST