Transcript Information: R_Transcript_133944.p1


Annotated TAIR IDAT2G44850.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0565 (InterPro:IPR018881); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45380.1); Has 138 Blast hits to 138 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18498672-18500823 | Forward length=400
E-Value3E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4986051078202
Replicate 23.9256539021974
Replicate 34.2179545148723
Condition 2: 8 Hour
Replicate 13.2601576558655
Replicate 26.0178010620754
Replicate 34.8335733663353
Condition 3: 24 Hour
Replicate 14.5525396768818
Replicate 24.3735640859502
Replicate 35.7044442810044


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_133944.p1 GENE.R_Transcript_133944~~R_Transcript_133944.p1 ORF type:complete len:353 (+),score=52.44,UPF0565|PF10561.5|1.1e+02,UPF0565|PF10561.5|2.5e-10 R_Transcript_133944:569-1627(+)
ATGAATAAAAGAACTAATTTCTCCACAAAAAAAAAAAATCCCCAAACCCGTATCCCTTTTCGGGTCGACCCAAGAATGGACCGTTGGACAGGTATCTTGAAAGTTCCTGTATACCCAAATGGCAATACTCTCTGTAGAGTAGCTGCATCTCTTTGCATTTCTCCTTCTTCAAAATCCCTTCTTGTGCCTACAGCTAATGCAATATTCTTTAATGGAGACAAGGTTGAAGGAACTGGTAACCCAGTTATTGAAAGATTGTCTGATTTACAAAACATAGCCAAGATTCTAGTCTCCAAATTTGGTGCTTCGATCAATGCTTGGGTTATTGAAGCTCCAATCTTTAATGGGCCTTTTGCTGTTTATAAGGAATTTCTTCCTTCCCTTAGTAATTGGGGCGAACCCTATTATTATAAACATGATGGGTTTCCTGCATCAACTTCTGTTGTTTCACTTCTTTCAAGTTTTCTTCATGAGAGAGCGAAAAATTCTACCCAGGAGGAACATCACCACCCTACACCATCTGTATCCACTTGTTTCCCCAGAACTTTTATACTCGGTTTTAGCAAGGTTGGTGTAGTGCTGAATCAGTTAGTCAGTGAGCTTGGCTTTGTGGACATAAAATGCATGGAGGGACCAGCACAAGCTGACCTGCAGAGCCAGATTATACCCAGGTCAAGAGAGAGCTTCTTGGACAGCATAACTGAGATCCACTATGTCGATGTTGGGTTGAATACCCCTGGTGCTTACCTCACTGACCATAATGTTATCGAGAGAATAGCTGGCCGGCTGATACAGAGGGATGGTGACTTGTGTTTCATGCTTCACGGGACCCCAAGGCAGTGGAACGACAAGAGGCGAGCCTGGATTTGTGATGAAAAGGACCAGTTCTGTCAAGTGCTTGAAGCCAAAAGGCTGAAGTGTATGGGTAAGCTCCAAGTCTGTGAGAGAGTATATTTTGCTGACAAGAATCCTGATATGCAGATGCATTTTGAAATAATCGAAGAATTTATTGTATTCATTGATGCTCGACATAGATTGACACTAGATATACATGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_133944.p1 GENE.R_Transcript_133944~~R_Transcript_133944.p1 ORF type:complete len:353 (+),score=52.44,UPF0565|PF10561.5|1.1e+02,UPF0565|PF10561.5|2.5e-10 R_Transcript_133944:569-1627(+)
MNKRTNFSTKKKNPQTRIPFRVDPRMDRWTGILKVPVYPNGNTLCRVAASLCISPSSKSLLVPTANAIFFNGDKVEGTGNPVIERLSDLQNIAKILVSKFGASINAWVIEAPIFNGPFAVYKEFLPSLSNWGEPYYYKHDGFPASTSVVSLLSSFLHERAKNSTQEEHHHPTPSVSTCFPRTFILGFSKVGVVLNQLVSELGFVDIKCMEGPAQADLQSQIIPRSRESFLDSITEIHYVDVGLNTPGAYLTDHNVIERIAGRLIQRDGDLCFMLHGTPRQWNDKRRAWICDEKDQFCQVLEAKRLKCMGKLQVCERVYFADKNPDMQMHFEIIEEFIVFIDARHRLTLDIHV*

Click here to download the sequence:
Link to NCBI Protein BLAST