Transcript Information: R_Transcript_134012.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35557716145556
Replicate 20.13633961309285
Replicate 30.09916336621711
Condition 2: 8 Hour
Replicate 10.5299970767802
Replicate 20.29040106287254
Replicate 30.19644600238514
Condition 3: 24 Hour
Replicate 10.24846111718295
Replicate 20.28643193364386
Replicate 31.3265275567817


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_134012.p1 GENE.R_Transcript_134012~~R_Transcript_134012.p1 ORF type:complete len:462 (+),score=68.88,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|3.3e-14,RVT_1|PF00078.23|9.1e-07 R_Transcript_134012:384-1769(+)
ATGGAATACTTATCTAGATGTATGGATGAGCTTAATGATGACAAAGAGTTCCACTATCATCCTAAATGCAAAAAGATCAAGCTAACCCACCTATGTTTTGCAGACGATATTATGCTCTTTACCAAAGGGGATTTGCAATCTATTTCTTTGTTACACAATGCTTTCACAAAGTTTTCTGATGCTTCAGGTTTGCAGGCCAATTTGGGGAAAAGTTCCATCTTCTTTGGGGGAGTTACTGAGGAGAGTAAAGCTGACATCTTGCTGAAACTTGGATACCAATCTGGTACTCTTCCAGTTAGGTATCTAAGTATTCCTCTAACCCATAAAAAAGTGACCATAGCTCAGTGCAAGCCTACTACAGACAAGATCCTGGCTAGAATCAACACTTGGGCTTCAAGAATGTTATCATATGCTGGTAGATTGCAGATTATAAAGTCATTTATATTTGGAATTCAAGCTTTCTGGGCTCAGATTATGATTTTTCCAAAGAAAGTTTTGAGGATGATTGAAAGTGAATGCTTGAAATTCTTATGGTCTGGGGTTGATAACATGAGGCATCCTGCAAAAATTGCTTGGAGTAAAGTATGCTCCCCAAAGAGTGCTGGTGGGCTGAACATTATGGATCTTTGCACTTGGAACAAAGCTGCTATTTTCAAGCTGTTTTGGGCAGTACACCAAAAAAAAGACACTATGTGGATTCAATGGCTGCATAGTTACTTCTTAAAAGGCAGGAGCTTGATTAATGTGAAAATTTCTGATAATTTATCCTGGATGATGAGGAATATTCTGCATGCTAGAGAGCTCATGGTTAGCATTCAACCTAAAATACATGATGATATAAAAATTAAGGAGATTTATAAACTCTTTCAGGGTGAGTTTGATAAAGTCTATTGGAGAAATATTGTATGCAATAATATGGCTAGACCAAAAGAAATTTTTTCCACTTGGCTGTTATTGCATAGAAGATATTTTACAGTGGACAAATTGCTGAAATGGGGAATTTTGTGTGATACTAATTGTCTGTTGTGTAAAGCTAAGAATGAGACTCATGAACATCTTTTTGTGGAGTGTCATTATGTCAGGAGAGTTTGGGAAGGAGTCCTCAATGGACTGAGATATCCTGCACCTTTCAGGTTGATCCCTCAATCCTGGAATGCTGCAATTAAGTGGATGCAGAAGAAATGCAAGGGTAGAAAACCTATTGCAATGCTGTTCAAAATGTGTATTGTGGAGATCTGGTATGGTATCTGGTGTGAAAGAAATATGAGAAGATTTCAGAAGGAGGAACTCGATGGACAGGTGGTCATTAAGCAAGTTCTCTATGCAGTTTTGATTAGAGCTTATAGTGTCCCTAAGCTTAGCCAGGTTCTTGATTCCGTTCTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_134012.p1 GENE.R_Transcript_134012~~R_Transcript_134012.p1 ORF type:complete len:462 (+),score=68.88,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|3.3e-14,RVT_1|PF00078.23|9.1e-07 R_Transcript_134012:384-1769(+)
MEYLSRCMDELNDDKEFHYHPKCKKIKLTHLCFADDIMLFTKGDLQSISLLHNAFTKFSDASGLQANLGKSSIFFGGVTEESKADILLKLGYQSGTLPVRYLSIPLTHKKVTIAQCKPTTDKILARINTWASRMLSYAGRLQIIKSFIFGIQAFWAQIMIFPKKVLRMIESECLKFLWSGVDNMRHPAKIAWSKVCSPKSAGGLNIMDLCTWNKAAIFKLFWAVHQKKDTMWIQWLHSYFLKGRSLINVKISDNLSWMMRNILHARELMVSIQPKIHDDIKIKEIYKLFQGEFDKVYWRNIVCNNMARPKEIFSTWLLLHRRYFTVDKLLKWGILCDTNCLLCKAKNETHEHLFVECHYVRRVWEGVLNGLRYPAPFRLIPQSWNAAIKWMQKKCKGRKPIAMLFKMCIVEIWYGIWCERNMRRFQKEELDGQVVIKQVLYAVLIRAYSVPKLSQVLDSVL*

Click here to download the sequence:
Link to NCBI Protein BLAST