Transcript Information: R_Transcript_13422.p1


Annotated TAIR IDAT5G62790.2
Annotated Gene Name1-deoxy-D-xylulose 5-phosphate reductoisomerase
Annotated Gene Symbol(s)DXR
Annotation TypeOrtholog
Chromosome Positionchr5:25214358-25217289 | Reverse length=497
E-Value5.8E-282
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 173.128104716676
Replicate 252.022680649299
Replicate 366.726208029557
Condition 2: 8 Hour
Replicate 151.207169794133
Replicate 253.077422289693
Replicate 372.567904030125
Condition 3: 24 Hour
Replicate 167.167427515448
Replicate 266.82134699969
Replicate 373.237839886518


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_13422.p1 GENE.R_Transcript_13422~~R_Transcript_13422.p1 ORF type:complete len:471 (+),score=95.33,DXP_reductoisom|PF02670.12|2.8e-48,DXP_reductoisom|PF02670.12|1.3e+04,DXP_redisom_C|PF08436.8|2.7e-40,DXPR_C|PF13288.2|1.4e-38 R_Transcript_13422:495-1907(+)
ATGGCTGCGAATCTCCTCCCAACAGTAGAATTCAAAGCTGTCTCCTTTTTAGATTCTTGTAACTCTACTTGGCACCCAAAGCTCAAAGGTGGATTCTCTTGGAGAAGAAAGGAATGCACACAAACTTTTGGTGGGATCCGTTGTTCAGCTCAGCCACCACCTCCTGCCTGGCCTGGACGAGCTGTGATTGATCCTGATTATAAGTCTTGGGATGGTCCAAAGCCTATTTCTATCATTGGATCTACTGGTTCTATTGGTACTCAGACTCTAGATATAGTTTCCGAGAATCCAGACAAGTTCAGAGTTGTAGCTCTTGCTGCTGGTACAAATGTGACTCTTCTTGCTGATCAGATCAGGAGATATAAACCTGAATTGGTTTCAGTTAAAAATGAGTCCTTGGCTAGCGAACTTCAAGAAGCACTTGCTGATGCTGAGCACAAGCCTCAAATTATTCCAGGAGAGGAGGGCATAGTTGAGGTAGCACGCCACCCAGATGCTGTTACAGTAGTTACAGGAATAGTCGGTTGTGCAGGGCTAAAGCCTACAGTCGCTGCCATTGAAGCAGGCAAAGACATAGCCTTAGCCAATAAGGAGACCCTCATTGCCGGTGGTCCTTTTGTTCTTCCCCTTGCACACAAGCATAATGTTAAGATTCTTCCAGCTGATTCCGAACATTCTGCAATCTTTCAGTGTATTCAAGGCTTGCCAGAGGGAGCTCTTAGACGCGTTATTTTGACTGCATCTGGTGGAGCTTTCAGGGATTGGCCTGTTGAAAAACTAAAAGAAGTCAAAGTAGCTGATGCTTTGAAGCATCCTAACTGGAGCATGGGGAAGAAGATTACAGTAGACTCTGCAACCTTGTTCAACAAGGGCCTAGAAGTTATTGAAGCCCATTACTTATTCGGAGCTGGATATGATGACATTGATATTGTAATTCATCCACAGTCGATAATCCATTCAATGATTGAAACACAGGATTCATCTGTTATTGCTCAGTTGGGGTGGCCTGATATGCGATTGCCTATCCTATACACACTGTCATGGCCAGACAGAGTATACTGTTCTGAAGTAACTTGGCCACGTCTTGATCTCTGCAAGCTTGGATCGCTTACATTCAAAGCTCCGGACAACAAGAAGTACCCATCTATGAATCTCGCTTATGCTGCAGGACGTGCTGGCGGCACTATGACTGGTGTCCTTAGTGCAGCTAATGAGAAGGCAGTTGAGATGTTCCTAGACGAGAAGATAAGGTACCTAGATATCTTCAGGGTTGTGGAGCTGACCTGTGATAAACATCAGGAAGAGTTGGTAAAATCACCCTCCTTGGAAGAAATTGTGCATTACGACCTCTGGGCTCGGGATTATGCTGCCAGTTTACAGCCTGCTTCTGGTTTGAGTCCTGTACCCGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_13422.p1 GENE.R_Transcript_13422~~R_Transcript_13422.p1 ORF type:complete len:471 (+),score=95.33,DXP_reductoisom|PF02670.12|2.8e-48,DXP_reductoisom|PF02670.12|1.3e+04,DXP_redisom_C|PF08436.8|2.7e-40,DXPR_C|PF13288.2|1.4e-38 R_Transcript_13422:495-1907(+)
MAANLLPTVEFKAVSFLDSCNSTWHPKLKGGFSWRRKECTQTFGGIRCSAQPPPPAWPGRAVIDPDYKSWDGPKPISIIGSTGSIGTQTLDIVSENPDKFRVVALAAGTNVTLLADQIRRYKPELVSVKNESLASELQEALADAEHKPQIIPGEEGIVEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNVKILPADSEHSAIFQCIQGLPEGALRRVILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAGYDDIDIVIHPQSIIHSMIETQDSSVIAQLGWPDMRLPILYTLSWPDRVYCSEVTWPRLDLCKLGSLTFKAPDNKKYPSMNLAYAAGRAGGTMTGVLSAANEKAVEMFLDEKIRYLDIFRVVELTCDKHQEELVKSPSLEEIVHYDLWARDYAASLQPASGLSPVPV*

Click here to download the sequence:
Link to NCBI Protein BLAST