Transcript Information: R_Transcript_134286.p1


Annotated TAIR IDAT3G52850.1
Annotated Gene Namevacuolar sorting receptor Homolog 1
Annotated Gene Symbol(s)VSR1, BP-80, ATELP, BP80, BP80B, ATELP1, ATVSR1, G
Annotation TypeOrtholog
Chromosome Positionchr3:19587999-19591690 | Forward length=623
E-Value3.4E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1010332327123
Replicate 22.7130051099711
Replicate 38.3648199087074
Condition 2: 8 Hour
Replicate 15.0897584440903
Replicate 25.5274089944504
Replicate 38.3619779262457
Condition 3: 24 Hour
Replicate 15.6749635843763
Replicate 26.3192033899969
Replicate 38.2386304158546


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_134286.p1 GENE.R_Transcript_134286~~R_Transcript_134286.p1 ORF type:internal len:178 (-),score=40.54,PA|PF02225.18|7.9e-08 R_Transcript_134286:1-531(-)
TGGGTCCTCAAGACTTCATCAAGAGTTTCAACTTTTCTCATCATCTTTGATCTGGGTTTTCAACATTTGATTAAATTGTTGAATTGGGTAAAAAAAATGAAGAAAAAGGCAGGATTTTGGGGGACAATTTGGTCTTTTCTTGTGATCATGATGATGGTAGTTAGGCCTTGTTCGGGGAGGTTTGTGGTGGAGAAAAACAGCTTAAGGGTGACATCACCAAGCTCATTAAAAGGTCTTTATGAATGTGCAATTGGGAATTTTGGGGTTCCTCAGTATGGAGGTACAATGGGTGGAATTGTGGTTTATCCTAAATCTAATCAAAAGGCTTGTAAACCTTTCTCTGATGGTGATATTACCTTCAATTCTAAGCCTGGTGGTTTGCCTGTCTTTATTCTCATTGATCGTGGTGAATGTTATTTCACCTTGAAGGCGTGGAATGCGCAGAAAGGTGGAGCAGCTGCTGTCCTTGTAGCAGATGATAGAATTGAGCCCTTGATTACCATGGACAACCCTGAAGAAGGAGATTCTCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_134286.p1 GENE.R_Transcript_134286~~R_Transcript_134286.p1 ORF type:internal len:178 (-),score=40.54,PA|PF02225.18|7.9e-08 R_Transcript_134286:1-531(-)
WVLKTSSRVSTFLIIFDLGFQHLIKLLNWVKKMKKKAGFWGTIWSFLVIMMMVVRPCSGRFVVEKNSLRVTSPSSLKGLYECAIGNFGVPQYGGTMGGIVVYPKSNQKACKPFSDGDITFNSKPGGLPVFILIDRGECYFTLKAWNAQKGGAAAVLVADDRIEPLITMDNPEEGDSQ

Click here to download the sequence:
Link to NCBI Protein BLAST