Transcript Information: R_Transcript_134371.p1


Annotated TAIR IDAT3G29290.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)emb2076
Annotation TypeOrtholog
Chromosome Positionchr3:11238421-11240125 | Forward length=540
E-Value1.5E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9732930761858
Replicate 20.72223146395129
Replicate 31.1819201216688
Condition 2: 8 Hour
Replicate 11.143074776407
Replicate 21.8679852152342
Replicate 32.4975189059992
Condition 3: 24 Hour
Replicate 11.579406885444
Replicate 21.1921761562474
Replicate 31.5057880374278


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_134371.p1 GENE.R_Transcript_134371~~R_Transcript_134371.p1 ORF type:complete len:407 (+),score=49.27,PPR_2|PF13041.2|0.027,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|8.1e-07,PPR_2|PF13041.2|9.5e-07,PPR_2|PF13041.2|0.0012,PPR_2|PF13041.2|3.7e-11,PPR_2|PF13041.2|3.4e-06,PPR_2|PF13041.2|2.5e-06,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|1.9e-08,PPR|PF01535.16|0.23,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.00034,PPR|PF01535.16|0.004,PPR|PF01535.16|0.018,PPR|PF01535.16|0.0001,PPR|PF01535.16|0.026,PPR|PF01535.16|0.00029,PPR|PF01535.16|0.0041,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|0.0013,PPR_3|PF13812.2|35,PPR_3|PF13812.2|5.1e+02,PPR_3|PF13812.2|0.96,PPR_3|PF13812.2|0.038,PPR_3|PF13812.2|17,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|0.76,PPR_3|PF13812.2|3,PPR_3|PF13812.2|0.0092,PPR_3|PF13812.2|0.17,PPR_1|PF12854.3|15,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|9.6,PPR_1|PF12854.3|7.3e-06,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|9.3,PPR_1|PF12854.3|3.8e+02,PPR_1|PF12854.3|5.3e+02,PPR_1|PF12854.3|0.0003 R_Transcript_134371:857-2077(+)
ATGGAGTTTGCAGGATTACAGCCTGACTTACATGCCTGTAATTCATTGTTGTCTTGTCTATCGAGGAATTATATGATCGATGACATGATGACAGTGTTTGGATATATGAATCGGACCAAGGTCATCTCGGGGCACTCATGTAGCTTAATATTAAAAGCTGTGGCTAATTGTCATGGTATTGATGCTGCCCTGCAAATGTTTTCAGAGTTGCGAGGTGATAGTGAGGTGGAGGAGCATTTCGATGTGATTGTTTATAATACTATGATATCTGTTTGTGGAAAAGCAAATAGATGGGTTGAAACGAAGATGGTATGGAAATTTATGAAGGATTGTCAAGTCTTTGGGACAACAGTTACTTATAGTGTACTGGTATGTACGTTTGTTCGTTGTGGTCAGTATGAGATTGCTATTGATGCCTATAGTGAGATGCTTCAGAATAAAGTTAAACCTAATTGCGATACCATGCAAGCCATCATAGGAGCCTGTATGAAGGAGGAAAAATGGGAATTGGGTTTAAGTGTGTTCCACAGTATGTTGAAATGTGGACTGAAGCCAAACCTGATTGCCTGCAATGCATTGATCAACTCACTTGGCAAAGTTGGTAAGGTAAGCGAAGCAGTAAAGGTGTACAAACATATAAGATCATTGGGCTATACACCTGATTCATACACGTGGAATGCATTGCTCGGTGCTTTTTATCGGGCCAATCAATATGCCAATGCTCTTCAACTTTTTGACAGCTTATCAATTGATAAGAGCTTCAGACCAAATCTGCATTTATACAACACTGCTCTAATGTGCTGTCAGAGGCTCGGACTTTGGGATAAAGCTCTCCAGTTGTTGTGGAAGATGGAAAAGTCCGGGATATCAGCTCCTACCACGTCATATAATATCGTTATTAGTGCCTGCGAAGTTGCTCGAAAGCCAAAGGTTGCTCTGCAAATCTATGAGCGTATGGCTGATCAGGATTGCACTCCTGATACTTTCACCCATTTGTCCCTACTGAGAAGCTGCATTTGGGGTGATTTATGGAGTGAAGTGGAGGACATTTTGGATGAGTCACCACCTGATGTGTCTCTATACAATGCTGCCATTCATGGAATGTGTCTTAGAGGAAGGATTGAGTTAGCCAAGAAACTATACATGAAAATGCGAGATATTAACCTTACACCTGATGGAAAGACACGAGCATTGATGCTTCAATATATGCAAAAAGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_134371.p1 GENE.R_Transcript_134371~~R_Transcript_134371.p1 ORF type:complete len:407 (+),score=49.27,PPR_2|PF13041.2|0.027,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|8.1e-07,PPR_2|PF13041.2|9.5e-07,PPR_2|PF13041.2|0.0012,PPR_2|PF13041.2|3.7e-11,PPR_2|PF13041.2|3.4e-06,PPR_2|PF13041.2|2.5e-06,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|1.9e-08,PPR|PF01535.16|0.23,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.00034,PPR|PF01535.16|0.004,PPR|PF01535.16|0.018,PPR|PF01535.16|0.0001,PPR|PF01535.16|0.026,PPR|PF01535.16|0.00029,PPR|PF01535.16|0.0041,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|0.0013,PPR_3|PF13812.2|35,PPR_3|PF13812.2|5.1e+02,PPR_3|PF13812.2|0.96,PPR_3|PF13812.2|0.038,PPR_3|PF13812.2|17,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|0.76,PPR_3|PF13812.2|3,PPR_3|PF13812.2|0.0092,PPR_3|PF13812.2|0.17,PPR_1|PF12854.3|15,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|9.6,PPR_1|PF12854.3|7.3e-06,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|9.3,PPR_1|PF12854.3|3.8e+02,PPR_1|PF12854.3|5.3e+02,PPR_1|PF12854.3|0.0003 R_Transcript_134371:857-2077(+)
MEFAGLQPDLHACNSLLSCLSRNYMIDDMMTVFGYMNRTKVISGHSCSLILKAVANCHGIDAALQMFSELRGDSEVEEHFDVIVYNTMISVCGKANRWVETKMVWKFMKDCQVFGTTVTYSVLVCTFVRCGQYEIAIDAYSEMLQNKVKPNCDTMQAIIGACMKEEKWELGLSVFHSMLKCGLKPNLIACNALINSLGKVGKVSEAVKVYKHIRSLGYTPDSYTWNALLGAFYRANQYANALQLFDSLSIDKSFRPNLHLYNTALMCCQRLGLWDKALQLLWKMEKSGISAPTTSYNIVISACEVARKPKVALQIYERMADQDCTPDTFTHLSLLRSCIWGDLWSEVEDILDESPPDVSLYNAAIHGMCLRGRIELAKKLYMKMRDINLTPDGKTRALMLQYMQKD*

Click here to download the sequence:
Link to NCBI Protein BLAST