Transcript Information: R_Transcript_134441.p1


Annotated TAIR IDAT5G48520.1
Annotated Gene Nameunknown protein; Has 609 Blast hits to 593 proteins in 129 species: Archae - 0; Bacteria - 41; Metazoa - 390; Fungi - 40; Plants - 64; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19661407-19666147 | Forward length=617
E-Value1.7E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8677448418782
Replicate 20.39062884495438
Replicate 30.5327148278175
Condition 2: 8 Hour
Replicate 10.4555509757627
Replicate 20.31201230476073
Replicate 31.519669726358
Condition 3: 24 Hour
Replicate 10.85424398986806
Replicate 20.20516519898211
Replicate 31.4252458865887


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_134441.p1 GENE.R_Transcript_134441~~R_Transcript_134441.p1 ORF type:complete len:215 (+),score=42.11,HAUS-augmin3|PF14932.2|1.3e-41 R_Transcript_134441:191-835(+)
ATGAGCGGGGGAAGACTGTGTGCGTTACTGGGTGAGCTGGGGTACGAGGGGCATGAGAAGCTAGACCCTGATAGCTTCGAATGGCCATTCCAATACGACGATGCTCGACCCATTCTTGATTGGCTCTGCTCTAGTCTCCGTCCCACCAATGTTCTCTCTCCTTCCGAGCTTTCCCAGTATGAGCAGTTTTTACAAGAAGGCAAATTTTTGGAGGGGGAGGATTTGGATTTTGCATATGATAGTATTTCTGCCTTTTCGGTTAGGAGAGACAATCAGGAGGCAGTTTTTGGAGCTGAAGAAGGATTGAAGGAGATTAGAGATGCAACGCTGGCATACAAAGCTGAAGCTTTAGAGCTGCAGAGACAGCTTAGTCAGTTGCAGTCTCAATTCGATATGCTCACTGGCCAGGCCTCAGCTCTAATCCAAGGGAAAAGGGCAAGAGTTGTGGCAACTTCTTCAGTTACAGGACAACTTGGTACAATGGAAGATAGCCTTTCAGCTCGAAACTTGGAGTTCTTGGAAGGATTGCTTCAACTGCGCAGGAGTTGGCACATTATCATTCCGGAGAAGATGATGGCATATATTTGGCATACTCTGATTATCATCAATACCTGGTTAATGATGTGGCTTGTGCAAAGGAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_134441.p1 GENE.R_Transcript_134441~~R_Transcript_134441.p1 ORF type:complete len:215 (+),score=42.11,HAUS-augmin3|PF14932.2|1.3e-41 R_Transcript_134441:191-835(+)
MSGGRLCALLGELGYEGHEKLDPDSFEWPFQYDDARPILDWLCSSLRPTNVLSPSELSQYEQFLQEGKFLEGEDLDFAYDSISAFSVRRDNQEAVFGAEEGLKEIRDATLAYKAEALELQRQLSQLQSQFDMLTGQASALIQGKRARVVATSSVTGQLGTMEDSLSARNLEFLEGLLQLRRSWHIIIPEKMMAYIWHTLIIINTWLMMWLVQRN*

Click here to download the sequence:
Link to NCBI Protein BLAST