Transcript Information: R_Transcript_134881.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value1.4E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.479823694928
Replicate 215.784718705824
Replicate 317.793626525583
Condition 2: 8 Hour
Replicate 117.358729257243
Replicate 219.965073072487
Replicate 322.721926865877
Condition 3: 24 Hour
Replicate 122.301869878341
Replicate 212.839311425586
Replicate 319.581678657385


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_134881.p1 GENE.R_Transcript_134881~~R_Transcript_134881.p1 ORF type:complete len:560 (+),score=72.94,RVT_3|PF13456.2|4.9e+03,RVT_3|PF13456.2|6.7e+03,RVT_3|PF13456.2|2.4e-21,zf-RVT|PF13966.2|3.3e-15,zf-RVT|PF13966.2|1.6e+04 R_Transcript_134881:564-2243(+)
ATGGAAAAATTCTTGTCATGGTCGGGTAAGGAGGTATTGATAAAGGCGGTGGCTCAAGCCATCCCAACCTATGCAATGGGAGTTTTCAAGCTACCAGGTGATTTTTGCAAGGAGATTGAAGCAATGATCCGAAAATTCTGGTGGGGACACAAGGATGGCAAGCGGAAAATCCATTGGATTAAATGGAGCAACTTATGTAAGTCAAAAGGTGATGGTGGACTTGGGTTTAGAGACTTATGTGCCTTTAATGATGCTATGCTTGCAAAGCAACTCTGGAGACTATTGTGTGAACCACATTCACTTTGTGCTCGAATTTTCCAAGCACGTTACTATCCTGGTACTAGTCCGCTTGAGGCAAATCTTGGAGCGAGACCAAGTTATGTATGGAGAAGCCTATGGGGGGCAAGGGAAGCTCTTAAGTTGGGGCTAAGATGGGGCATAGGGAATGGAGATAAAGTAAGGGTATGGGAGGATCCGTGGCTTCCTAGACCCTATTCTTTCAAGCCTATATCTACTAGAGCCCATGATGCACCAAGCCTCAAAGTTAGTGACCTGATTGACAAAGAGGCGGGCGAGTGGCGATTGGAGGTAATGCAAACTCTTTTTGATCCTGCAAATGTGGAGATAATTAGAAATATTCCCCTGTGCAATAGGTGGCCTGATGACCGGGTTGTATGGAAATATACCCCCACTGGATGCTTTACAGTTCGGTCAGCGTATCACCTGATCATGGAACAACGAGATAGGCACAAAGATGGATCAAGTTCTTCAAGCAAGCATGTGTTATGGAAGCGTTTATGGCAATTGGATATACCTCCGAGGATCAAGAACTTTGGATGGCAGGCTATCTCTCATGCTCTACCAACTGGGGAAGCGGTAGCAAGGCGGGTTGACATGGGAACCTTGGGATGCCAACTTTGCGGGGCAACGGAGGATACGGACTTGCATGCTCTTTTATACTGCCCCTGGGCATGTGGGCAATGGGAAAGGAGTGGTTGGGATGAAAGTTTGTGGTCTAAAATTTACACATGTGTATGGGATTGGTGGGAGGATGTTTGGCGGCCAAATAAAGTTGATGACTTTGGGGCCTTTCTTGCTGCAGTTTGGGGCATTTGGATAGAAAGATGTAAAATACTTTATGATATTGAGCATGAGCAGGATGAACTAGCATGTGCCAATGCACGAAAATTTGTGGCCAGATACCGAGAAGCAAACGCCAAAACTATTGTGTCCTGTGAGAACCTGAATGCAGCTTGGACACCCCCTCCTAGTGGGGTATGGAAACTGAATGTAGATGCTGGAAAGTGTGGCGACTGGGGCTATGGTTGGGGTATGACTGTAAGAGATACTATGGGGGATATTGTGATGGTAGCGGTTCATCAAACACCGGGAAAATTTGTGGCTGAATTAGAAGAGGCAAAAGCGTTGCTTTTTGGGCTTCGATTGGCATGGGAAGCAGGCTACAGATCTTTAATAGCTGAAAGTGACTGCCTTAGTCTTATCTCTAAGCTTAAGCACAAGCAGAAATTACGTTCACCCTTAGGTTATATTATTGATGCAATTTTAGAGATTGCTACCGCTTTTGATTTTATTTCTTGGTCACATGTACGTAGGGAGGGCAATTGTGTAGCCCATAGCATAGCTAGGCTCCAACCTATTGAATTGGAGGATAGAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_134881.p1 GENE.R_Transcript_134881~~R_Transcript_134881.p1 ORF type:complete len:560 (+),score=72.94,RVT_3|PF13456.2|4.9e+03,RVT_3|PF13456.2|6.7e+03,RVT_3|PF13456.2|2.4e-21,zf-RVT|PF13966.2|3.3e-15,zf-RVT|PF13966.2|1.6e+04 R_Transcript_134881:564-2243(+)
MEKFLSWSGKEVLIKAVAQAIPTYAMGVFKLPGDFCKEIEAMIRKFWWGHKDGKRKIHWIKWSNLCKSKGDGGLGFRDLCAFNDAMLAKQLWRLLCEPHSLCARIFQARYYPGTSPLEANLGARPSYVWRSLWGAREALKLGLRWGIGNGDKVRVWEDPWLPRPYSFKPISTRAHDAPSLKVSDLIDKEAGEWRLEVMQTLFDPANVEIIRNIPLCNRWPDDRVVWKYTPTGCFTVRSAYHLIMEQRDRHKDGSSSSSKHVLWKRLWQLDIPPRIKNFGWQAISHALPTGEAVARRVDMGTLGCQLCGATEDTDLHALLYCPWACGQWERSGWDESLWSKIYTCVWDWWEDVWRPNKVDDFGAFLAAVWGIWIERCKILYDIEHEQDELACANARKFVARYREANAKTIVSCENLNAAWTPPPSGVWKLNVDAGKCGDWGYGWGMTVRDTMGDIVMVAVHQTPGKFVAELEEAKALLFGLRLAWEAGYRSLIAESDCLSLISKLKHKQKLRSPLGYIIDAILEIATAFDFISWSHVRREGNCVAHSIARLQPIELEDRI*

Click here to download the sequence:
Link to NCBI Protein BLAST