Transcript Information: R_Transcript_134881.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value6E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.593273861702
Replicate 232.39429207086
Replicate 344.177279649723
Condition 2: 8 Hour
Replicate 139.002484880255
Replicate 243.124557836572
Replicate 342.785939319484
Condition 3: 24 Hour
Replicate 143.947802407319
Replicate 238.59670305851
Replicate 348.934654049992


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_134881.p2 GENE.R_Transcript_134881~~R_Transcript_134881.p2 ORF type:5prime_partial len:140 (+),score=0.34,RVT_1|PF00078.23|1.3e-14 R_Transcript_134881:1-420(+)
GGGAAACTCTGCCGAAATTTTCCCAGAAATTTCCCAATTTTATTTTATTTATCGGTTTTAAATCGAAATTATATTTATTTTATTTGCCTAAAATCCGGGGTGTTACAAAAGCCAACGAGAGGGCTCCGGCAAGGAGACCCACTCTCGCCGTACCTATTTCTTTTGTGTGCAGAAGGCTTGTCTAACTTGCTTACATGTGCAGCCAATGAAGGGACTTTTCAAGGCCACAAGGTTTGTAATGGTGCACCAACAGTGACTCATTTACTCTTTGCCGACGATACCATTATTTTTGCAAAAGCAAATGAGGATCATGCAATGAAAATTTCAGCACTCTTGAATTTATATGAACAAGCTTCGGGCCAACAAGTCAACAAGGGGAAGACAACGATTTCTTTTAGCAAGGGGTGCCACAAACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_134881.p2 GENE.R_Transcript_134881~~R_Transcript_134881.p2 ORF type:5prime_partial len:140 (+),score=0.34,RVT_1|PF00078.23|1.3e-14 R_Transcript_134881:1-420(+)
GKLCRNFPRNFPILFYLSVLNRNYIYFICLKSGVLQKPTRGLRQGDPLSPYLFLLCAEGLSNLLTCAANEGTFQGHKVCNGAPTVTHLLFADDTIIFAKANEDHAMKISALLNLYEQASGQQVNKGKTTISFSKGCHKL*

Click here to download the sequence:
Link to NCBI Protein BLAST