Transcript Information: R_Transcript_135501.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39680349901563
Replicate 21.3693239401933
Replicate 30.82995426073016
Condition 2: 8 Hour
Replicate 11.2420366277588
Replicate 22.10645988359
Replicate 31.9730011543899
Condition 3: 24 Hour
Replicate 11.497248297459
Replicate 20.31964143319677
Replicate 32.5377048912345


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_135501.p1 GENE.R_Transcript_135501~~R_Transcript_135501.p1 ORF type:5prime_partial len:138 (+),score=13.30,zf-RVT|PF13966.2|8.3e-07,zf-RVT|PF13966.2|4e+03 R_Transcript_135501:3-416(+)
CGGAGGTCGGGGTGGTGCCTTTCCCCTGATATGTGTGTTATGTGTGGTGATAGTGGTGAGACGGCTGCTCATCTCTTTTTGCATTGTAGGGTTGCACGTTCTTTGTGGGGAAAGTTGTTTGGGGTGAAAGGGGAGGTTGTGGTGTTCCCCTCTAGTGTACTGGAATTCTTGCGGGTTCGCTGTGTGGATTTTGGGGTTAATAAGCAGCTTAAGATTCTCTGGCGGAACGCCACTCTTGCTGTTTTGTGGTGTATACGGCTGGAACGGAATAGGAGAGTGTTTTCCCAGTTGACGTTCCACCCTGACTTGATCTGGGAGCGCATTACTTTTTTAGCCTCATTGTGGTCTAAGGCTATAGGGGCCTTTAGGAGTTATCCTATCACTGAAGTCCAACATAATTGGGCTTGCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_135501.p1 GENE.R_Transcript_135501~~R_Transcript_135501.p1 ORF type:5prime_partial len:138 (+),score=13.30,zf-RVT|PF13966.2|8.3e-07,zf-RVT|PF13966.2|4e+03 R_Transcript_135501:3-416(+)
RRSGWCLSPDMCVMCGDSGETAAHLFLHCRVARSLWGKLFGVKGEVVVFPSSVLEFLRVRCVDFGVNKQLKILWRNATLAVLWCIRLERNRRVFSQLTFHPDLIWERITFLASLWSKAIGAFRSYPITEVQHNWACL*

Click here to download the sequence:
Link to NCBI Protein BLAST