Transcript Information: R_Transcript_135510.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value9E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.77948587706984
Replicate 20.672479372764
Replicate 30.89670503045437
Condition 2: 8 Hour
Replicate 10.60996816594561
Replicate 21.1140652874612
Replicate 30.6459647907611
Condition 3: 24 Hour
Replicate 10.65360305274602
Replicate 20.54941926061936
Replicate 30.7010296874807


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_135510.p1 GENE.R_Transcript_135510~~R_Transcript_135510.p1 ORF type:5prime_partial len:281 (+),score=35.61,zf-RVT|PF13966.2|1.5e-18 R_Transcript_135510:3-845(+)
AAGTATGGTATTTCTAATGGGTGGGATGCTCTTAACTGTGGGGGTACGACACACTCGTCTCCGTGGAAATTTGTTTCTCAAATAGCGAGCTCCTTTTTGCCTTTGGTGGAGCTGCGTATTGGGACAGGCGGTCGAGTTAGATTTTGGGAGGATGTGTGGACTGGTTGGCAGTCTTTCCAGGAGAGGTTCCCGCGGATTTTTACTTTATCCTCACTACATGGGGCGACTGTTTCTCAATTTTACTCCGAAAGCTCTAATTCTTGGGATTTGCATTTGAGGCGGCTGGTTTTGGATCGAGAGGTGGAGGAGCTTGTTTCTTTGCTGGGGGTCTTGGATACTATTACCTTAGGGGGTGGAGATGATAGTCGGGTTTGGAAAGGGGATTCTACCGGGACCTTCTCTTGTCGTTCCTTCCTTCGGTGTCTTGGGAGTCCTAGGGGGACTACCTTTCCGTTGGCTGGCCTGATTTGGAAAGCGAAAGCTCCCCTCAAGGTGCGGGATTTTATTTGGACCTTAGCCTTAGGGAGGATTAACACTAATGATATGCTGCAAATGCGGAGGTCGGGGTGGTGCCTTTCCCCTGATATGTGTGTTATGTGTGGTGATAGTGGTGAGACGGCTGCTCATCTCTTTTTGCATTGTAGGGTTGCACGTTCTTTGTGGGGAAAGTTGTTTGGGGTGAAAGGGGAGGTTGTAGTGTTCCCATCTAGTGTACTGGAATTCCTGCAGGTTCGTTGTGTGGGTTTTGGGGGTAATAAGCAGCTTAAGATTCTCTGGCGGAACGCCACTCTTGCTGTTTTGTGGTGTATCTGGCTGGAGCGAAATAGGAGAGTGTTCTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_135510.p1 GENE.R_Transcript_135510~~R_Transcript_135510.p1 ORF type:5prime_partial len:281 (+),score=35.61,zf-RVT|PF13966.2|1.5e-18 R_Transcript_135510:3-845(+)
KYGISNGWDALNCGGTTHSSPWKFVSQIASSFLPLVELRIGTGGRVRFWEDVWTGWQSFQERFPRIFTLSSLHGATVSQFYSESSNSWDLHLRRLVLDREVEELVSLLGVLDTITLGGGDDSRVWKGDSTGTFSCRSFLRCLGSPRGTTFPLAGLIWKAKAPLKVRDFIWTLALGRINTNDMLQMRRSGWCLSPDMCVMCGDSGETAAHLFLHCRVARSLWGKLFGVKGEVVVFPSSVLEFLQVRCVGFGGNKQLKILWRNATLAVLWCIWLERNRRVFS*

Click here to download the sequence:
Link to NCBI Protein BLAST