Transcript Information: R_Transcript_135695.p1


Annotated TAIR IDAT3G48210.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex, subunit Spc25 (InterPro:IPR013255); Has 194 Blast hits to 194 proteins in 72 species: Archae - 0; Bacteria - 4; Metazoa - 72; Fungi - 39; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17849435-17851396 | Forward length=315
E-Value6E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5814839283024
Replicate 24.3380785984087
Replicate 34.7327970239984
Condition 2: 8 Hour
Replicate 14.4519754449537
Replicate 25.544020291203
Replicate 35.5504925037547
Condition 3: 24 Hour
Replicate 17.2098898731633
Replicate 24.010047071014
Replicate 35.7884838841381


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_135695.p1 GENE.R_Transcript_135695~~R_Transcript_135695.p1 ORF type:internal len:121 (-),score=25.13 R_Transcript_135695:3-362(-)
CTGATAGAGCTACGAAGAGCTTGCGAGGCAGAGATTTCTAATCATCAGCAAAATATCGATTCTACTGTTGACTCCTTTACCAAGTCTTTGGGGTCAATCAGATCTCGAACAGAGCAAAGTGCTCATAATCAAGTGGAATTGGGAAAACTCAAAGGTCAATTGAGAGAAGTAGAGGATGAATTGGTCAAGGCTCTTGCAGTCAAGACACGGAGGGAGGCTAAGCGGATGAGCCTTACGGATTCTCTTTCTGAAACAAGAGTCAAAGTAGAAGAGCTTCATAAAATTGTAGAGGATCAAAGAGCTCGAACTGATGAATATGCAGCCATCCTATCCCGACAGTCAAAAGCTCTAGCAGAATCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_135695.p1 GENE.R_Transcript_135695~~R_Transcript_135695.p1 ORF type:internal len:121 (-),score=25.13 R_Transcript_135695:3-362(-)
LIELRRACEAEISNHQQNIDSTVDSFTKSLGSIRSRTEQSAHNQVELGKLKGQLREVEDELVKALAVKTRREAKRMSLTDSLSETRVKVEELHKIVEDQRARTDEYAAILSRQSKALAES

Click here to download the sequence:
Link to NCBI Protein BLAST