Transcript Information: R_Transcript_135829.p1


Annotated TAIR IDAT1G77110.1
Annotated Gene NameAuxin efflux carrier family protein
Annotated Gene Symbol(s)PIN6
Annotation TypeOrtholog
Chromosome Positionchr1:28970855-28974408 | Forward length=570
E-Value1.8E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3610095111761
Replicate 22.936545512769
Replicate 35.1259832382998
Condition 2: 8 Hour
Replicate 15.3937394813862
Replicate 26.958456237292
Replicate 36.2197826601326
Condition 3: 24 Hour
Replicate 15.8598598867916
Replicate 25.3981402879035
Replicate 36.2754957493901


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_135829.p1 GENE.R_Transcript_135829~~R_Transcript_135829.p1 ORF type:5prime_partial len:286 (+),score=71.14,Mem_trans|PF03547.14|1.7e-81 R_Transcript_135829:2-859(+)
GCTGCTGGGCCCACTGCTGCTAAGAAGAAAGGTGGTGGTGGTGGTGATGGTGGTGGAAAGGATCTTCATATGTTTGTATGGAGTTCAAGTGCTTCTCCTGTTTCTGAAGCTGGTTTGCATGTCTTTAGAGGTGGTGGTGCTACTGCTAATACTAATCCTGATTTTGGTCATGATCTTGGTGGGGTAGCTCACCCTAAAGATTATGATGATTATGGAAGGGATGAGTTTAGCTTTGGGAATAGGCCCGGTGGGCCGGAAGGGGAAGGCCCAACATTGTCAAAGCTCGGTTCGAGCTCAACCACCGAGCTCCGGCCGAAGGCAGCTGCTCAGGGTGAATCCAAACCACCTTCTATGCCCCCTGCAAGTGTTATGACCAGGCTCATCTTGATCATGGTTTGGAGGAAACTTATCAGGAACCCTAACACATACTCTAGTCTCATTGGCCTTACTTGGTCCTTGATTGCTTTTAGGTGGAACATCAAAATGCCTGCCATTGTAGCGGGTTCGATCAAAATTCTCTCAGATGCAGGGCTTGGCATGGCTATGTTCAGTCTTGGTTTGTTCATGGCGTTGCAGCCAAGGATCATTGCTTGTGGGAATGCCATGGCCACCTTCGCTATGGCGGTCAGGTTCATTACAGGTCCCGCGGTCATGGCGGCCGCCTCAATCGCTGTTGGACTAAGAGGATCTCTGTTACACATTGCCATTGTCCAGGCAGCTTTACCACAAGGAATTGTCCCTTTTGTCTTTGCCAAGGAATACAATGTCCATCCTGATATTCTCAGCACAGCGGTTATATTTGGAATGTTAATAGCATTGCCAATTACATTGGTCTACTACATCTTGCTGGGACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_135829.p1 GENE.R_Transcript_135829~~R_Transcript_135829.p1 ORF type:5prime_partial len:286 (+),score=71.14,Mem_trans|PF03547.14|1.7e-81 R_Transcript_135829:2-859(+)
AAGPTAAKKKGGGGGDGGGKDLHMFVWSSSASPVSEAGLHVFRGGGATANTNPDFGHDLGGVAHPKDYDDYGRDEFSFGNRPGGPEGEGPTLSKLGSSSTTELRPKAAAQGESKPPSMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLIAFRWNIKMPAIVAGSIKILSDAGLGMAMFSLGLFMALQPRIIACGNAMATFAMAVRFITGPAVMAAASIAVGLRGSLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLVYYILLGL*

Click here to download the sequence:
Link to NCBI Protein BLAST