Transcript Information: R_Transcript_135854.p1


Annotated TAIR IDAT2G32000.1
Annotated Gene NameDNA topoisomerase, type IA, core
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:13615999-13621563 | Reverse length=865
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.887371221233
Replicate 23.3982451540829
Replicate 35.0315377378832
Condition 2: 8 Hour
Replicate 13.6799565816669
Replicate 24.3946241768804
Replicate 35.4349909256419
Condition 3: 24 Hour
Replicate 16.7413676714877
Replicate 26.042885961927
Replicate 36.0981928665228


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_135854.p1 GENE.R_Transcript_135854~~R_Transcript_135854.p1 ORF type:complete len:865 (+),score=144.96,Topoisom_bac|PF01131.16|3.7e-103,Toprim|PF01751.18|8.2e-17 R_Transcript_135854:190-2784(+)
ATGGCTCCCAAGGTTCTCATGGTAGCGGAGAAACCGAGCATTGCCTTATCAATTGCAACGGTTCTCTCTGGGGGTCAGATGTCGACTAGGAGGGGCAGTACTGAGGTGCATGAATTTGATGGAAAGTTTTTGGGGACTCGTAGTCATATTAAAGTAACTTCAGTGATTGGGCATGTTTTTAGTGTAGATTTTCCTGGAACATATCAAGACTGGGCAACTACAGATCCACTGGATCTTTTCCAAGCTCCTGTTGTTAAATCAGAATCAAATCCAAAGGCTCATATCCGGAGACATTTGAGTCAAGAAGCTCGTGGTTGTAGCCATCTTGTCTTGTGGTTGGATTGTGACCGAGAAGGAGAGAATATTTGTTTTGAAGTTATTGAGTGTGCTGGTTTTTATTTCAAGGAGGGGGACACAAGAGTTTATCGTGCTCGATTTTCCTCTGTTACTGAGAAAGATATTTTGAAGGCTATGGAAAATCTTGTTCAGCCAAACAGAAATGAGGCATTGGCTGTGGATGCGCGACAAGAGATAGACTTGAAAGTTGGTGTTGCCTTTACGCGTTTTCAGACTAGTTTCTTTCAAGGCAAATACGGAAATTTGGACTCTCGAGTTATCTCTTATGGACCATGTCAAACTCCAACTCTTGGATTTTGTGTACAACATTATTTGAATATCAACACATTTAAGCCAGAAAGGTTTTGGGTTGTGCATCCATATGTCGTGCATAAGGGTTATGAGCTAAAGTTGGAATGGGAGCGTGAAAAGCTTTTTGACTTGGATGTTGCCATGATGTTTCAGAAACTGGTGACTGAGGATGGTGCTGTTGAAGTTATCAATGTATTTCAGAAGCAGGAGCATAAGAGTCGACCTGCTGGCTTAAATACAGTGAATCTCTTGAAGGTTGCTTCAAGTGCACTGGGCTTTGGTCCGCAGATGGCTATGCAGATAGCAGAAAGGTTGTATACGCAAGGTTTCATAAGTTATCCTCGCACAGAAAGTACATCTTATCCTTCTTCATTTGATTTCCGAGGCACACTTGAATCACAGAGGAGTAACCCACTATGGGGTGGTTATGTTCAAACATTGCTAGCTGATGGTTACCATAAGCCACGTGTTGGAACTGATGCTGGTGATCATCCACCAATTACCCCAATGCGCTCAGCAACAGAGGAGATGCTAGGCTATGATGCTTGGAAGTTGTATCAGTATGTTTGTCAACATTTTATTGGCACTGTGTCTCTGGACTGTAAATATGTCAGGACAAAGGTTGAATTTTCAACTGGTGGAGAAACTTTTCATTGTACAGGACAGTATGTCACATCCCATGGATTTACGTCCATAATGCCATGGTTGGCTATCAGTGAGAAAAAGCTTCCTGACTTTACCAAGGGGGAGAGATTAAAAATTTCAAAGGTTGAGCTGTATGAGGGAAACACTACACCTCCTGATTACCTTACTGAAAGTGAGGTCATCTCTCTCATGGAAAAGCATGGAATAGGTACAGATGCATCGATTCCTGTACACATCAACAATATATGTGAGCGCAACTATGTGCAGGTGCAAAGTGGGCGGAGGTTGGTCCCAACTGCGTTGGGTGTCACCCTAGTTAGAGGTTACCAATGTATTGATCCAGATCTCTGTTTGCCAGACATTAGAAGTTTTATTGAACATCAGATTACTCTTATTGCTAAGGGTCAAGCAGATCATTCACTGGTTGTTAAGCATGTCTTGGAACAATTCAAGCAGAAGTATGTATATTTTGTCAAACAGATTGAACATATGGATACCCTGTTTGAAGCCCAATTCTCACCACTGTCAGAAACAGGACGAGCAATGAGTAAATGCGGCAAATGTCTTCGCTATATGAAGTATATTGCTCCTCAGCCATCCCGTCTCTATTGTGGTACATGCGAGGATGTCTATTATCTTCCTCAAAAGGGCTTAATCAAGCTGTACAAGGAACTCGTTTGCCCTTTGGACAACTTTGAGCTCTTGCTTTTCTCCTTGCCTGGTCCCGAAGGCAAGTCATTTCCTCTGTGCCCATACTGCTACAACAACCCTCCATTTGAAGGTATTGACACACTTTTCGGTGCTCCTAAGACTGGTCCAGCCAAACTGGGCAAGGGAGCTGGGATGCCATGCTTCCTTTGCCCACATCCTACATGCCGGCATTCTCTGACAGCTCAAGGGGTTTGTGCCTGCCCTGAATGTAGTGGAACCCTTGTACTGGATCCCGTCAGCGCTCCTAAGTGGAGGCTTTTCTGCAACATGTGCAATTGCCTAGTTTTTCTACCTCAAGGTGCACATCGGATCTCTACCACCCAAGACCGCTGTCCTGATTGCGATTCAACTATCATAGAAGTCGACTTCAATAAGAATAACACACCATTGGTAGACGGAGCTACCTTGCATGCCGGATGCATTCTGTGTGATGAGCTCCTCCATTCATTGATCGAGATGAAACATGGAAGATCATCGTTCAGGCGCTTTGGAGGTAGAGGAAGAGGAAGAGGTAGAGGGAGAGGGAGAGGATCGAGAGGGCGAGGTGGTAAGAAGAATGTCGACCCCAAAATGAGCTTCCGGGATTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_135854.p1 GENE.R_Transcript_135854~~R_Transcript_135854.p1 ORF type:complete len:865 (+),score=144.96,Topoisom_bac|PF01131.16|3.7e-103,Toprim|PF01751.18|8.2e-17 R_Transcript_135854:190-2784(+)
MAPKVLMVAEKPSIALSIATVLSGGQMSTRRGSTEVHEFDGKFLGTRSHIKVTSVIGHVFSVDFPGTYQDWATTDPLDLFQAPVVKSESNPKAHIRRHLSQEARGCSHLVLWLDCDREGENICFEVIECAGFYFKEGDTRVYRARFSSVTEKDILKAMENLVQPNRNEALAVDARQEIDLKVGVAFTRFQTSFFQGKYGNLDSRVISYGPCQTPTLGFCVQHYLNINTFKPERFWVVHPYVVHKGYELKLEWEREKLFDLDVAMMFQKLVTEDGAVEVINVFQKQEHKSRPAGLNTVNLLKVASSALGFGPQMAMQIAERLYTQGFISYPRTESTSYPSSFDFRGTLESQRSNPLWGGYVQTLLADGYHKPRVGTDAGDHPPITPMRSATEEMLGYDAWKLYQYVCQHFIGTVSLDCKYVRTKVEFSTGGETFHCTGQYVTSHGFTSIMPWLAISEKKLPDFTKGERLKISKVELYEGNTTPPDYLTESEVISLMEKHGIGTDASIPVHINNICERNYVQVQSGRRLVPTALGVTLVRGYQCIDPDLCLPDIRSFIEHQITLIAKGQADHSLVVKHVLEQFKQKYVYFVKQIEHMDTLFEAQFSPLSETGRAMSKCGKCLRYMKYIAPQPSRLYCGTCEDVYYLPQKGLIKLYKELVCPLDNFELLLFSLPGPEGKSFPLCPYCYNNPPFEGIDTLFGAPKTGPAKLGKGAGMPCFLCPHPTCRHSLTAQGVCACPECSGTLVLDPVSAPKWRLFCNMCNCLVFLPQGAHRISTTQDRCPDCDSTIIEVDFNKNNTPLVDGATLHAGCILCDELLHSLIEMKHGRSSFRRFGGRGRGRGRGRGRGSRGRGGKKNVDPKMSFRDF*

Click here to download the sequence:
Link to NCBI Protein BLAST