Transcript Information: R_Transcript_13588.p1


Annotated TAIR IDAT5G17790.1
Annotated Gene Namezinc finger (Ran-binding) family protein
Annotated Gene Symbol(s)VAR3
Annotation TypeHomolog
Chromosome Positionchr5:5869810-5872671 | Reverse length=758
E-Value7E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53685179278585
Replicate 20
Replicate 30.16843189408936
Condition 2: 8 Hour
Replicate 10.48011499896559
Replicate 21.1509277418257
Replicate 30.66733862574952
Condition 3: 24 Hour
Replicate 11.1253827072404
Replicate 20.54057007084748
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_13588.p1 GENE.R_Transcript_13588~~R_Transcript_13588.p1 ORF type:complete len:408 (+),score=73.58 R_Transcript_13588:184-1224(+)
ATGGGAATCCAAACACTAATCTCATCACCTCTTCTTACACTACCCCATGTTCAAATCTCCACCCCACTCGCCGCTCTTTACTCTTCCTCTCCACCACCCTTTCTCTCCCACCACCTCCCTCCTTGGCCACTCCTACCACCACTACCACCACCACCACCAGCCAAAATGGGCAGCACCACCGCTGCCCGCTGCATATCTCTCTTCCCACTCCTCATTCCCCGCTCTCCTTCTCTCCGTCTCCTCCGCCACTTCACTCACCGCTCCCCTCTCTTTCTCTCTCCTCCCAAGCTCTCCCACCAACTCCACACTCAACCCCTCAACTGGGACGACAACAACAACGAAACCCACTTCTCTTCTTTTCCAGAAGCTTCCAATAACAACCCCAAAAGAGCTTCTCATCCATGGCCTGAATGGTTGGGCTTTACCCATTGGCTTTCCCTTAGTGGGTTCTCTAAGGGCTCCATCCATGTTGATGAGTTTGTTGATGATTTGGAATTGCCCCTTGATTTTCTTAGGGCTGCTCATGGCTGCTTGGCCTTTGCCCGCCAGTACCCTAATCTTTTGTGGTGTCTTTCAAGAGAGGATATTGAGGTGGTTATCACCAGTGGGTCTCCATTTTTGTTCAAGGATGCTTCTGGTGCTTCAACAAGGTTGAAGTCTTTTCTGGGTAATGCCACAAATGATGTATTAGAATCTGATAGACCGAGCACAGTTGATCTCATGAAGTTTCTAGTCAGTTATGCACGCATGGCAATTGTTTCTTCAGAAAAAATGTCCGTGTACAGTAGAGTCGAATCATCAACGAGGAAACTATTCAGTGAGTTGGCTAAATCAGGAGGTATTTCTGTGGAGTCTGTTCCACCTGTAGAGAAATGTATCCCTGAAGGAAATGGGCAAGCACCAAGTTCATTTGGAAAAAATATTGTAATGAAGAGAGGCGACTGGATATGCTCAAGATGCAGTTTTATGAACTTTGCAAAAAAACTCAAAATGTCTTCAGTGCGAGGAACCTCGGCCAAAGAGATACCTGACTGGTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_13588.p1 GENE.R_Transcript_13588~~R_Transcript_13588.p1 ORF type:complete len:408 (+),score=73.58 R_Transcript_13588:184-1224(+)
MGIQTLISSPLLTLPHVQISTPLAALYSSSPPPFLSHHLPPWPLLPPLPPPPPAKMGSTTAARCISLFPLLIPRSPSLRLLRHFTHRSPLFLSPPKLSHQLHTQPLNWDDNNNETHFSSFPEASNNNPKRASHPWPEWLGFTHWLSLSGFSKGSIHVDEFVDDLELPLDFLRAAHGCLAFARQYPNLLWCLSREDIEVVITSGSPFLFKDASGASTRLKSFLGNATNDVLESDRPSTVDLMKFLVSYARMAIVSSEKMSVYSRVESSTRKLFSELAKSGGISVESVPPVEKCIPEGNGQAPSSFGKNIVMKRGDWICSRCSFMNFAKKLKMSSVRGTSAKEIPDWW*

Click here to download the sequence:
Link to NCBI Protein BLAST