Transcript Information: R_Transcript_135887.p1


Annotated TAIR IDAT1G40087.1
Annotated Gene NamePlant transposase (Ptta/En/Spm family)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:14999762-15001868 | Reverse length=390
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14961443405507
Replicate 20.43025205771103
Replicate 30.23470018028845
Condition 2: 8 Hour
Replicate 10.50175952760748
Replicate 20.50403627101033
Replicate 30.55793885103648
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.40366668479934


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_135887.p1 GENE.R_Transcript_135887~~R_Transcript_135887.p1 ORF type:internal len:488 (+),score=82.23,Transposase_24|PF03004.10|3e-08 R_Transcript_135887:3-1463(+)
TGCACATTCTTCATTTTGTGTCCAGGCATAATGGCCAGGGTGGAAAGTGAAAATGGTGATTATACTAGTAGTAATGATGGGCTAAGGGGTTGTACATGTGCGAAGAAAGTGCTGACTGCTAAAAAAAGAGGGACAAAGCTGTTAGTCAATTTTAATACAAAAACTCAACCAATTGGGGAAAATGGGAAGTTGTTTATTAGCTACATCGGGGCTTTCACTCGCCAGATTGTGCCAATTGATTATGAATGTTGGAATGACGTACTGGATGAGATCACCGACTTCATATGGAATGATGTTAAGAGAACATTTGAATGGGGACGTAATCACAAGAAAAATCTGAAAAAAGATGTGTTACAAAGAGCCGCAAAAGCTTTTCGCACTTTCAAAGTTGATCTGGGGAGAAAGCATTTGAGAGACAAAGATGGCACAATCAATGAGGAGCCTCCGAAAAAATATACATTCATAGCACAAGAATCGTGGGATGCTTTTGTTGCAAGGCGACAAGATCCGAAATTCTTGACTTTAAGTGACACGAATCGAGAAAGAGCAAAGAAGCCTGATTATCCTTACAGGGCATCACGCAATGGATATTCTGGCCTCGAATATGATTCGTTGACAACCGATGGAAAGGACCCAACGAAAGAATCTCTTCCTAGAGAAGTTTTATGGAAAAAGGGGCACATGAACAAGAAAGGAGAAATTGTTGATGAGAGTAGCAAAAGTGTAGTTCAACAAATAAATGCCTTATCCCAACAAGGAAGTCAAGAGGGAGCTTCCAAACGAAATGACATCTTGTCGAAGATCATAAATAAGAAAGACAAAGGTGGCTTTGTTAGAGGTGTTGGAGGCGGAGTCACACAAACAGAATACTACGGTCATGAAGACTTAGCAACCAGGTATGAAGAGGAAGTGACAAGTTTGAGAGAGCAGATGTCATTGATGCGAAAGGAACTCTTAGACTTCAAGGAAATGGTGAACAATCCTCTACACGTAGTGAATGATCCACAACCAGAGGAGATATTTCCCAAAAGTGATAAAGGAAGTTGTACTAGGCCACAACAAGATAAATCATCACCTATAGATACACATTTTGTAGAAGCAACTTCCCCTTTGAAAGCACCTTCACCAAAACCAACATCTTCATCCTCCCTTCGTGATTGTCAATTATATCTTGAAAAGAAGTGTGTCAAATGTGTGGCATTAGGAAAGCTCTTTTCAGGACCACCTAACCAACCAATCACCCTTCACTGTAAGGTGCTGGACTCTAGCTTGGTTAAGGTCCTTATTACACATGCATATATGCCTAAAACACCCTTACCGATCCCACTAGAAGATGAAGCTTTCACTCTTGGAGAAGGTGTAGGCAATTTTGTTGCATGGCCAAAAGATTTTATAAAAATGGGAAAGTCGGAATCAAGCTCGGGCATAGACAACAACAATGAGAAGGAGATGAGTGTGAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_135887.p1 GENE.R_Transcript_135887~~R_Transcript_135887.p1 ORF type:internal len:488 (+),score=82.23,Transposase_24|PF03004.10|3e-08 R_Transcript_135887:3-1463(+)
CTFFILCPGIMARVESENGDYTSSNDGLRGCTCAKKVLTAKKRGTKLLVNFNTKTQPIGENGKLFISYIGAFTRQIVPIDYECWNDVLDEITDFIWNDVKRTFEWGRNHKKNLKKDVLQRAAKAFRTFKVDLGRKHLRDKDGTINEEPPKKYTFIAQESWDAFVARRQDPKFLTLSDTNRERAKKPDYPYRASRNGYSGLEYDSLTTDGKDPTKESLPREVLWKKGHMNKKGEIVDESSKSVVQQINALSQQGSQEGASKRNDILSKIINKKDKGGFVRGVGGGVTQTEYYGHEDLATRYEEEVTSLREQMSLMRKELLDFKEMVNNPLHVVNDPQPEEIFPKSDKGSCTRPQQDKSSPIDTHFVEATSPLKAPSPKPTSSSSLRDCQLYLEKKCVKCVALGKLFSGPPNQPITLHCKVLDSSLVKVLITHAYMPKTPLPIPLEDEAFTLGEGVGNFVAWPKDFIKMGKSESSSGIDNNNEKEMSVN

Click here to download the sequence:
Link to NCBI Protein BLAST