Transcript Information: R_Transcript_135898.p1


Annotated TAIR IDAT3G17950.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6146311-6147169 | Forward length=211
E-Value4.5E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.857928261943
Replicate 215.697234120756
Replicate 326.397288086995
Condition 2: 8 Hour
Replicate 123.319871378329
Replicate 222.786803400065
Replicate 323.164912601256
Condition 3: 24 Hour
Replicate 130.93837831162
Replicate 221.215058551889
Replicate 335.020327499036


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_135898.p1 GENE.R_Transcript_135898~~R_Transcript_135898.p1 ORF type:5prime_partial len:210 (+),score=32.48 R_Transcript_135898:3-632(+)
CTGGGATTGCAGCCGTTGAATGTAAGAATTGGGTTAGGAGGAAGGGCTCGTGATTATTTTGGGTCAATGTCATTCAATACAACTACTATGCTAACTGGCTCTCCAACTTCCTCTACAGATTCTTCCTCAGATTTAGACACTGAGTCTACAGGTTCCTTCTTCCATGACAGGAGCATCACACTGGGTAGTCTAATAGGAGTTTCCAGCATCCTAGAACTTTCTAGAGGATCTATAAGGGGGAGAAGACCTGAACCATTGAAAGTCAAGAAGCCTTGCAAGTCTAAACCATGGATTTTCTCTCTATGTTCAAGGGACAGCATAGATGTCAAGAGCACTACAAACAACACTCCTTCCCTTGGCCAGTTTCTTGCTGTGGAAAGAAGGGCTGCTAATACTGAATGCAGGAGAAACCAGAGCCCCAATGTGTATGTCCCGGACGAAATTTCTCTGGCACAGCCCATTCCTCAGGCCAACTCATTGTTTGTAAATGGACGCATTGCCCCTCCTCAATCCAGTCCTTGTTCTGGTTTAGAAGTCGAAAGTGGCCAAAGCAGAGGTGTCGAGCATGGGAATAATGGTCATGTAGTTCCTGTACTGTTTTCATGCATGTGTGGTCAGGACAGCCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_135898.p1 GENE.R_Transcript_135898~~R_Transcript_135898.p1 ORF type:5prime_partial len:210 (+),score=32.48 R_Transcript_135898:3-632(+)
LGLQPLNVRIGLGGRARDYFGSMSFNTTTMLTGSPTSSTDSSSDLDTESTGSFFHDRSITLGSLIGVSSILELSRGSIRGRRPEPLKVKKPCKSKPWIFSLCSRDSIDVKSTTNNTPSLGQFLAVERRAANTECRRNQSPNVYVPDEISLAQPIPQANSLFVNGRIAPPQSSPCSGLEVESGQSRGVEHGNNGHVVPVLFSCMCGQDSH*

Click here to download the sequence:
Link to NCBI Protein BLAST