Transcript Information: R_Transcript_135950.p1


Annotated TAIR IDAT2G37310.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15665102-15667075 | Reverse length=657
E-Value6.7E-198
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.84678684841479
Replicate 20.32468505798399
Replicate 30.90524908026032
Condition 2: 8 Hour
Replicate 10.42071932899047
Replicate 20.38420759177295
Replicate 31.0604033695759
Condition 3: 24 Hour
Replicate 11.3411777418246
Replicate 20.94739084581518
Replicate 31.2786631604029


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_135950.p1 GENE.R_Transcript_135950~~R_Transcript_135950.p1 ORF type:complete len:582 (+),score=81.02,PPR_2|PF13041.2|39,PPR_2|PF13041.2|0.24,PPR_2|PF13041.2|0.055,PPR_2|PF13041.2|2.4e-10,PPR_2|PF13041.2|0.0003,PPR_2|PF13041.2|7.2e-06,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|8.5e+03,PPR_2|PF13041.2|1.8e-08,PPR_2|PF13041.2|4.9e-05,PPR_2|PF13041.2|2e+02,PPR|PF01535.16|8.4,PPR|PF01535.16|16,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|0.024,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|72,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|7.7e-06,PPR|PF01535.16|0.066,PPR|PF01535.16|4.7,PPR|PF01535.16|0.12,PPR|PF01535.16|0.0007,PPR|PF01535.16|4.6,PPR_3|PF13812.2|3.8e+02,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|4.9,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|6.3e-06,PPR_3|PF13812.2|40,PPR_1|PF12854.3|52,PPR_1|PF12854.3|3.7e+03,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|6.1e+02,PPR_1|PF12854.3|0.0003,PPR_1|PF12854.3|4.9e-05,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|24,PPR_1|PF12854.3|1.1e+04,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|13,ATP13|PF12921.3|2.3e+03,ATP13|PF12921.3|5.8,ATP13|PF12921.3|32,ATP13|PF12921.3|3.8e+03,ATP13|PF12921.3|2.5e+03,ATP13|PF12921.3|1.8 R_Transcript_135950:84-1829(+)
ATGAAGATCTTAAAACGACCGTTAAACTTTCAAACCCCATCTTCTATTTCCATTCAACGCGCCATACAAAGCCTATACAACAACCCCAATACCCTCAACATACACGACTATGGGCACCTTGTTCAGTTTTGCACCAACCAACGTCTCATACCCCAAGCCAAACAACTCCATGCTCGTCTCATTCTCTTCAATATCACCCTAGATAACTTCGTAGGATCAAAACTTATCAATTTCTACTCGAGCATCGGCCATCTCCGTAATGCACGGAAGGTGTTCGATAAAATTCCTCAGAGAAATGCTTGGTCGTATAATGCTATGCTAGTTGCTTATTCTTTTCATGAGCACCCTATGGAGACATTGAGGTTGTACTCATCCTTTGTAAAGGGAACAACTGTTTTGGGTAAACCAGATAATTTTTCTCTAACATGTGTTATGAAGGCGTATTCGAGCTTGTTTTCGGATGCCACTTTGGCTAAGGAGGTTCATTGTCATGTTTTAAGACAAGGGTTTGATTCTGATTTGTTTGTTGCTAATGCTTTGATTACTTGTTACATGAGATGTGATGAGATGGGTTTGGCTAGAAAAATGTATGATACGATGGAGAAGAAAGATATTGTGTCATGGAATTCTTTGATTTCAGGTTATTCTCATGGTGGGTATTATCAGGACTGTCTGAAACTGTACAAGCTGATGTTGGACTCTAAGAATTTGAAGCCGGATGCGGTAACTGTAGTTAGTGTTCTGCAGGCTTGTGCACAGGCGAAGGATCTTGTTCAAGGCATGGAAGTCCATCGGTTTGTGGTCGAGAATAATATTAGAATGGACATCTCAGTTTACAATGCAGTTATAGGATTGTATGCTAGGTGTGATAGGTTGGACTATGCTAAGGAGTTATTTGATGAGATGAATGAGAAAGATGAGGTTACGTATGGTTGTTTGATTTCTGGTTATTTGGCTCATGGATATGTGGACAGAGCATTGGATCTTTTTCGAGGAATGGAAAGTCTCAGCTTGAGTATATGGAATGGTTTAATTTCAGGTTTAGTGCAGAACAATATCTGTGAGGTCAGCTTAAGTTTAACGAGGGAAATGCAGGCATCAGGTTTCAGACCAAATTCAGTTACACTTTCGAGTATCCTCTCTGCATTATCCTACTTCTTCGACTTAAAAGGAGGTAAACAGGTACACGCCTATGCAATTAGAAATGGTTTTGATGGCTGTGTTTATGTGACAACGGGCATAATAGATGTGTATGGAAAAGCTGGATTTCTCCAGGGTGTAAGCCATGTGTTTGATCGATCCAGACAAAGGAATGTGATCATTTGGACAGCTACAGTTGCAGCATATGCATCTTATGGAGATGCTAATCATGCCCTTCACCTTTTTGATGATATGTTGAATTATGGGACTGAACCAGATCCTGTCACCTTCGTTGCAGTCTTAACAGCTTGTGCTCGTTTAGGAGATACAGTCAAGGCTTGGAAGATATTCGACGACATGCAGCAAAAATATGGCATCCAGCCTGTGGCAGAGCATTATTACTGCATCATACGTGTCCTGAGTCAAACTGGAAACTTGGCTAAAGCAGCTGAATTCATGTCTAAGATGCCCATTGAACCAACTCATGGACTTTCCAATGCACTATTGAATGGCACTTCAATTCAGGGTGAAATTGAGCTAGGGAAATTTGTTTCTGAGTATTTATCTGGAACAAAACCTGAAATTATAGAAAATACTACAGGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_135950.p1 GENE.R_Transcript_135950~~R_Transcript_135950.p1 ORF type:complete len:582 (+),score=81.02,PPR_2|PF13041.2|39,PPR_2|PF13041.2|0.24,PPR_2|PF13041.2|0.055,PPR_2|PF13041.2|2.4e-10,PPR_2|PF13041.2|0.0003,PPR_2|PF13041.2|7.2e-06,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|8.5e+03,PPR_2|PF13041.2|1.8e-08,PPR_2|PF13041.2|4.9e-05,PPR_2|PF13041.2|2e+02,PPR|PF01535.16|8.4,PPR|PF01535.16|16,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|0.024,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|72,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|7.7e-06,PPR|PF01535.16|0.066,PPR|PF01535.16|4.7,PPR|PF01535.16|0.12,PPR|PF01535.16|0.0007,PPR|PF01535.16|4.6,PPR_3|PF13812.2|3.8e+02,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|4.9,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|6.3e-06,PPR_3|PF13812.2|40,PPR_1|PF12854.3|52,PPR_1|PF12854.3|3.7e+03,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|6.1e+02,PPR_1|PF12854.3|0.0003,PPR_1|PF12854.3|4.9e-05,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|24,PPR_1|PF12854.3|1.1e+04,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|13,ATP13|PF12921.3|2.3e+03,ATP13|PF12921.3|5.8,ATP13|PF12921.3|32,ATP13|PF12921.3|3.8e+03,ATP13|PF12921.3|2.5e+03,ATP13|PF12921.3|1.8 R_Transcript_135950:84-1829(+)
MKILKRPLNFQTPSSISIQRAIQSLYNNPNTLNIHDYGHLVQFCTNQRLIPQAKQLHARLILFNITLDNFVGSKLINFYSSIGHLRNARKVFDKIPQRNAWSYNAMLVAYSFHEHPMETLRLYSSFVKGTTVLGKPDNFSLTCVMKAYSSLFSDATLAKEVHCHVLRQGFDSDLFVANALITCYMRCDEMGLARKMYDTMEKKDIVSWNSLISGYSHGGYYQDCLKLYKLMLDSKNLKPDAVTVVSVLQACAQAKDLVQGMEVHRFVVENNIRMDISVYNAVIGLYARCDRLDYAKELFDEMNEKDEVTYGCLISGYLAHGYVDRALDLFRGMESLSLSIWNGLISGLVQNNICEVSLSLTREMQASGFRPNSVTLSSILSALSYFFDLKGGKQVHAYAIRNGFDGCVYVTTGIIDVYGKAGFLQGVSHVFDRSRQRNVIIWTATVAAYASYGDANHALHLFDDMLNYGTEPDPVTFVAVLTACARLGDTVKAWKIFDDMQQKYGIQPVAEHYYCIIRVLSQTGNLAKAAEFMSKMPIEPTHGLSNALLNGTSIQGEIELGKFVSEYLSGTKPEIIENTTG*

Click here to download the sequence:
Link to NCBI Protein BLAST