Transcript Information: R_Transcript_135993.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value4E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.93604927972917
Replicate 20.96906001921376
Replicate 31.5271158397435
Condition 2: 8 Hour
Replicate 10.75341122914601
Replicate 20.68802713357494
Replicate 30
Condition 3: 24 Hour
Replicate 11.1773234475746
Replicate 21.1310389174655
Replicate 30.7857124759399


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_135993.p1 GENE.R_Transcript_135993~~R_Transcript_135993.p1 ORF type:complete len:195 (+),score=34.70,UBN2|PF14223.2|2.5e+03,UBN2|PF14223.2|8.2e-26,UBN2_2|PF14227.2|3.2e-10,DUF4219|PF13961.2|3.5e-09 R_Transcript_135993:763-1347(+)
ATGGCTACCAACAATTCAACTTCCTTATTTTCATACACAGAACCCCAACTTCCAATTTTTGATGGAGAGCATTATGATTATTGGAGTAGTCAAATGCAGACCTTTTTTATATCACAAGACTTATGGGAATTGGTTGAAAATGGATATGAAGATTTACCAGAAAAGGCAGATGAGGCACAACAAAAATCATACAAGGAAAATAAAAGAAGGGATGCCCTTGCATTGCGATATATACATGCAGGGGTGAGCAAACTCATCTTTCCTCGATTATTTGGCATCGACAAGGCCAAAGAAGCATGTGATATACTAAAAAAGGAGTTTCTAGGCAATGAAAAAGTTATTGCCGTCAAGTTGCAAAACTTATGGAAAGATTTTGATAACTTGGAAATGAAAAAATCTGAAAGCATTCGAGATTATTTCTCTCATGTTGCAGAGATTGTGAATCAAATTAGAAGTCTTGGTGATACAATTGAAGACAAGAAGGTCATGGAGAAACTATTAAGATCTTTGACATCAACTTATAATTCGCTGCATTTATCATTGAAGAGTCAAAAGATCTCTCATCACTCAGCATGTATGAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_135993.p1 GENE.R_Transcript_135993~~R_Transcript_135993.p1 ORF type:complete len:195 (+),score=34.70,UBN2|PF14223.2|2.5e+03,UBN2|PF14223.2|8.2e-26,UBN2_2|PF14227.2|3.2e-10,DUF4219|PF13961.2|3.5e-09 R_Transcript_135993:763-1347(+)
MATNNSTSLFSYTEPQLPIFDGEHYDYWSSQMQTFFISQDLWELVENGYEDLPEKADEAQQKSYKENKRRDALALRYIHAGVSKLIFPRLFGIDKAKEACDILKKEFLGNEKVIAVKLQNLWKDFDNLEMKKSESIRDYFSHVAEIVNQIRSLGDTIEDKKVMEKLLRSLTSTYNSLHLSLKSQKISHHSACMS*

Click here to download the sequence:
Link to NCBI Protein BLAST