Transcript Information: R_Transcript_135994.p3


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.58323056711939
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.75631710918279
Condition 3: 24 Hour
Replicate 10
Replicate 20.20421536009794
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_135994.p3 GENE.R_Transcript_135994~~R_Transcript_135994.p3 ORF type:5prime_partial len:216 (+),score=42.21,UBN2|PF14223.2|3e+03,UBN2|PF14223.2|1.1e-25,UBN2_2|PF14227.2|4.1e-10,DUF4219|PF13961.2|4e-09 R_Transcript_135994:3-650(+)
GGTGAGGGATGGGATTGTGAAGATCTTGAATGTAGATGGCTTGCAGTGCAGTCAAGAGTTTTCGCCGGTCAAGGAACTGTTGTAGCAAACCCACCTCGAAAAGAACCCCAACTTCCAATTTTTGATGGAGAGCATTATGATTATTGGAGTAGTCAAATGCAGACCTTTTTTATATCACAAGACTTATGGGAATTGGTTGAAAATGGATATGAAGATTTACCAGAAAAGGCAGATGAGGCACAACAAAAATCATACAAGGAAAATAAAAGAAGGGATGCCCTTGCATTGCGATATATACATGCAGGGGTGAGCAAACTCATCTTTCCTCGATTATTTGGCATCGACAAGGCCAAAGAAGCATGTGATATACTAAAAAAGGAGTTTCTAGGCAATGAAAAAGTTATTGCCGTCAAGTTGCAAAACTTATGGAAAGATTTTGATAACTTGGAAATGAAAAAATCTGAAAGCATTCGAGATTATTTCTCTCATGTTGCAGAGATTGTGAATCAAATTAGAAGTCTTGGTGATACAATTGAAGACAAGAAGGTCATGGAGAAACTATTAAGATCTTTGACATCAACTTATAATTCGCTGCATTTATCATTGAAGAGTCAAAAGATCTCTCATCACTCAGCATGTATGAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_135994.p3 GENE.R_Transcript_135994~~R_Transcript_135994.p3 ORF type:5prime_partial len:216 (+),score=42.21,UBN2|PF14223.2|3e+03,UBN2|PF14223.2|1.1e-25,UBN2_2|PF14227.2|4.1e-10,DUF4219|PF13961.2|4e-09 R_Transcript_135994:3-650(+)
GEGWDCEDLECRWLAVQSRVFAGQGTVVANPPRKEPQLPIFDGEHYDYWSSQMQTFFISQDLWELVENGYEDLPEKADEAQQKSYKENKRRDALALRYIHAGVSKLIFPRLFGIDKAKEACDILKKEFLGNEKVIAVKLQNLWKDFDNLEMKKSESIRDYFSHVAEIVNQIRSLGDTIEDKKVMEKLLRSLTSTYNSLHLSLKSQKISHHSACMS*

Click here to download the sequence:
Link to NCBI Protein BLAST