Transcript Information: R_Transcript_136242.p1


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value9E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.197892176471
Replicate 212.315137744175
Replicate 311.563497344212
Condition 2: 8 Hour
Replicate 113.184696510055
Replicate 215.265602026194
Replicate 314.137312117801
Condition 3: 24 Hour
Replicate 110.375162881751
Replicate 212.40608312595
Replicate 313.99550347768


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_136242.p1 GENE.R_Transcript_136242~~R_Transcript_136242.p1 ORF type:complete len:208 (-),score=37.73,Myb_DNA-bind_3|PF12776.3|2.6e-18 R_Transcript_136242:253-876(-)
ATGGCAACAAATCAAAAAAAGAATAAAGATGATATTGAAGGTGGTGGTGAAATAGGGAGACATGATTATGGAAGAGTTAAGTGGTCAAAAGAATTACTCCACATTCTTTGTGATCTTTGTATTCAATATACTGAAAAAAATAAAGGAAAACGTGGCGAGGTTATTTCTCAAAGAATAGAATGGAAAAAAGTTGTGCCAGAATTTGAGAAAAAGATTAAATTATCATGGGACAAACCAAGACTTAAAAACAAATTAGACAACTATAAGTCATCTTGGAGTCTTTGGAAGCAATTGAAAGGGAAGGAGACGGGATTAGAGTGGGATGCTGAAAAAGGAACACTAAGTGCTAGTGATGAATGGTGGGACTCAAAGATTAAGGAAAATCCCAAATTCAAGGAATTTCGAAATGAGGGCATTGAACCTGAGCTTGAACATAAGTTGAATGCTATATTCCTTTGTAGTGCTACAGGGGCGGCTAAGTACACTCCAGTGGCCGAAAACCCACAAGAGCATCAACATCAATTTCATGATAATGATGAAGTTTACATTCCCATTCCACTCATCCAACCACTTGATATGAATGGTAGTTATAGTGGTAATAATTTTAATGTAAGGACTACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_136242.p1 GENE.R_Transcript_136242~~R_Transcript_136242.p1 ORF type:complete len:208 (-),score=37.73,Myb_DNA-bind_3|PF12776.3|2.6e-18 R_Transcript_136242:253-876(-)
MATNQKKNKDDIEGGGEIGRHDYGRVKWSKELLHILCDLCIQYTEKNKGKRGEVISQRIEWKKVVPEFEKKIKLSWDKPRLKNKLDNYKSSWSLWKQLKGKETGLEWDAEKGTLSASDEWWDSKIKENPKFKEFRNEGIEPELEHKLNAIFLCSATGAAKYTPVAENPQEHQHQFHDNDEVYIPIPLIQPLDMNGSYSGNNFNVRTT*

Click here to download the sequence:
Link to NCBI Protein BLAST