Transcript Information: R_Transcript_13628.p1


Annotated TAIR IDAT5G04895.1
Annotated Gene NameDEA(D/H)-box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1428796-1434516 | Forward length=1161
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5200395472421
Replicate 23.5325958422589
Replicate 34.0319020445342
Condition 2: 8 Hour
Replicate 14.6056242955129
Replicate 24.823313598185
Replicate 37.4861690047843
Condition 3: 24 Hour
Replicate 17.1507924151865
Replicate 24.7573897520659
Replicate 36.4964369389928


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_13628.p1 GENE.R_Transcript_13628~~R_Transcript_13628.p1 ORF type:complete len:1159 (+),score=254.34,HA2|PF04408.19|4.6e-22,OB_NTP_bind|PF07717.12|1.6e-15,Helicase_C|PF00271.27|1.6e-11,dsrm|PF00035.21|1.9e-07,DEAD|PF00270.25|1.3e-06 R_Transcript_13628:403-3879(+)
ATGCATTCAAAGCGTGCCCTAGTTCTTCTTTGCCGCAAATGGATTTCATCTCTCTCTAAACGCACAACTTCGATTCTAACCAATGCTTTCTTCTTCCATCATTCTCTGGCTTCTCCAGTATTGAACCCGCCATTTTTCCGCGGTATTTTACCAAATTCCCATCTTCATTTTCTTCGTCAAAATCGCAGCTTTTGCCGTTATGCTGTTGAGCAGTTCTCAGATGATGAAGACGAGTGCGATTTCGAGACTCATGCGGCGTCGTCTTCTGTGGCAAACATTGATGAGTGGAAATGGAAACTTAGCATGCTGTTACGCAATGAGCAAGAGCAAGAGATTGTGTCGAGGGACAAGAGAGATCGAAGGGATTTTGAACAGATATCTAATCTTGCCAAAAGAATGGGGCTTTACTGTGAGATATATGGGAAGGTAGTTGTTGCAAGCAAGGTTCCTCTTCCTAATTATCGGCCAGATCTTGATGATAAGCGGCCGCAAAGAGAGGTTTCAATTCCATTAAGCATACAGAGAAGAGTGGAAGGCTTGCTTCAGGAACACCTTGATAGGATGCATTTAGATCGTCAAAAGACCATTGATGATGCACTTGAATCTAAGGCCAGTGCTAAAGACCAGAATGTCAATGTGGATGAAAATCCAGATTCTTTTTTAGATGATATGGTTATGGAAAAGGTTCTGCAGAGGAGGAGCTTGAGATTGCGTAACATGCAGAGAGCCTGGCTGGAATCACCTGAAGGTAGGAAGATGCTAGAGTTCAGGAAATCACTGCCTGCTTTCAGTGAGAAGGAGAGGCTACTTCAGGCGATAGCAAAGAATCAGGTTATTGTAATTTCGGGTGAGACTGGTTGTGGTAAGACCACACAACTTCCTCAGTACATATTAGAGTCAGAAATAGAATCTGGGCGTGGTGCATTCTGTAACATTATCTGTACTCAGCCTCGAAGAATATCTGCCATGGCTGTTGCTGAAAGAGTCTCTGCAGAGAGGGGAGAACCTCTTGGTGAATCTGTTGGCTATAAAGTTCGATTAGAAGGAATGAAAGGGAAAAATACCCATCTACTTTTTTGTACCAGTGGTATTTTGCTACGACGATTACTGAGTGATCACAACTTGAATGGTGTCACCCATGTCTTTGTGGATGAAATTCATGAGCGAGGAATGAATGAAGACTTCCTATTGATTGTGTTAAAGGATCTTCTCCCTCGACGTCGAGATTTGAGGTTAATTTTAATGAGTGCAACATTGAATGCTGAGTTATTTTCAAGTTACTTTGAAGGAGCTCCAATGTTTCACATACCGGGATTCACATATCCTGTGAGGGCACATTTCCTAGAAGATGTACTCGAAATGACTGGATATAAGTTGACATCATTCAACCAAATTGATGATTATGGACAAGAGAAAGTTTGGAAGACACAAAAACAATTGGTGCCTAGGAAGAAAAAGAATCAGATTACTGCACTGGTTGAGGATGCTCTCAAGAACCAAAGCTTTGAGAATTATAGTCCTCGTGCACGGGATTCTCTCTCAAGTTGGTCACCTGATTGTATTGGCTTTAATCTGATTGAAGCAGTTTTGTGTCATATATGTCGAAAGGAACGCCCTGGTGCTGTTTTAGTTTTCATGACTGGCTGGGAAGATATTAGTTGTTTACGAGACCAACTTAAAGCCCATCCGCTGTTAGGAGACCCTAACAGGGTTTTGCTGCTTACCTGTCATGGTTCCATGGCTACAGCTGAACAGAGACTAATTTTTGAGAGACCTCCACCTAACGTGCGTAAAATAGTTCTGGCTACAAATATGGCAGAAGCTAGCATCACAATCAATGATGTTGTTTTTGTGGTTGATTGCGGGAAAGCTAAAGAGACCACCTATGATGCTTTAAATAACACACCTTGTCTGCTGCCATCTTGGATATCAAAAGCTTCTGCTCGGCAAAGAAGGGGCCGGGCTGGTCGTGTGCAGCCAGGAGAATGCTACCATTTGTATCCCAGATGTGTGTATGAAGCTTTTGCTGATTATCAGCTCCCTGAACTTCTAAGAACTCCATTAAATTCTCTTTGTTTGCAAATTAAAAGTTTGCAAATTGGAAGCATTGCAGAGTTTTTGTCAGCAGCTCTGCAGGCACCAGAATCGTTGGCAGTCCGGAACGCTATTGATTTTCTGAAAATGATTGGTGCCTTGGATGAGAATGAGAGTCTGACAAATCTTGGGAAATACTTGGCTATGCTCCCGGTGGACCCCAAACTTGGGAAAATGCTTATCATGGGAGCCATCTTCCGCTGTTTTGATCCTGTCTTGACAGTTGTGGCAGGTCTTAGTGTTAAGGATCCTTTTCTCTTACCCCAGGATAAAAAGGATTTAGCTGGGATAGCAAAGGCCAGATTCTCTGCTAAGGATTACAGTGACCATATGGCCCTTGTTCGTGCATATGAAGGATGGAAAGATGCTGAGCGAGAAGGATCAGCTTATGAGTACTGCTGGAGGAATTTCCTTTCAGCCCAAACTCTTCGGGCTATCCATTCCATTAGAAAGCAATTCAGTTTCATTTTAAAAGATGCTGGTCTGATAAATGACGATGCAAGCACAGACAATAAACTAAGCCATAACCAGTCATTGGTCCGTGCAGTCATATGCTCTGGGCTCTTTCCTGGCATTGCATCTGTTGTGCACCGGGAGACATCGATGTCATTTAAAACCAAGGATGATGGGCAAGTGTTACTATATGCAAATTCAGTAAATGCACGCTACCAGACAATTCCGTATCCTTGGCTGGTATTCGGAGAAAAAGTGAAGGTCAATACTGTTTTCATTCGTGACTCAACAGGAGTATCAGATTCAATATTGATGCTTTTTGGTGGTGCTCTATTTCGTGGGTCACAGCCTGGGCATTTGCATATGCTGGATGGTTATGCTGAGTTCTTCGTGGACCCTAATGTTGCTGAGTGCTACTGCAAGCTGAAGGAGGAACTTGATAAGCTTCTACAGAAGAAGCTTGAAGTTCCTACTATTGACATCCTGAAAGAAGGAAAGTACCTGATGTTCGCTATTCAGGAACTTATATTGGGAGATCAATGTGAGGGTAGATTTGTGTTTGGCCGTGAAAGCAAGAAACCTAAGGACTCCACAGACAGCAATAAATTCTCGAAAGATGGAATGAACCCAAAGAGCTTGCTGCAAACTCTATTGATGAGAGCTGGGCACGCCCCTCCCAAATACAAAACCAAACACCTTAAAACAAACGAGTTCAGGGCATTGGTGGAATTTAAGGGTATGCAATTTGTGGGAAAACCCCAGAGAAACAAGCAACTTGCAGAGAAGGATGCTGCTGTAGAGGCTTTGGCATGGCTGACTCACACTGACAACAATGACCGGGATGAAGATGACGACTCCCGCCCAGATGTTACTGACAACATGCTGAAACTTCTCGGAAAACGTAGGAAATCAAAGCGTCGTGGAGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_13628.p1 GENE.R_Transcript_13628~~R_Transcript_13628.p1 ORF type:complete len:1159 (+),score=254.34,HA2|PF04408.19|4.6e-22,OB_NTP_bind|PF07717.12|1.6e-15,Helicase_C|PF00271.27|1.6e-11,dsrm|PF00035.21|1.9e-07,DEAD|PF00270.25|1.3e-06 R_Transcript_13628:403-3879(+)
MHSKRALVLLCRKWISSLSKRTTSILTNAFFFHHSLASPVLNPPFFRGILPNSHLHFLRQNRSFCRYAVEQFSDDEDECDFETHAASSSVANIDEWKWKLSMLLRNEQEQEIVSRDKRDRRDFEQISNLAKRMGLYCEIYGKVVVASKVPLPNYRPDLDDKRPQREVSIPLSIQRRVEGLLQEHLDRMHLDRQKTIDDALESKASAKDQNVNVDENPDSFLDDMVMEKVLQRRSLRLRNMQRAWLESPEGRKMLEFRKSLPAFSEKERLLQAIAKNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAVAERVSAERGEPLGESVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFSSYFEGAPMFHIPGFTYPVRAHFLEDVLEMTGYKLTSFNQIDDYGQEKVWKTQKQLVPRKKKNQITALVEDALKNQSFENYSPRARDSLSSWSPDCIGFNLIEAVLCHICRKERPGAVLVFMTGWEDISCLRDQLKAHPLLGDPNRVLLLTCHGSMATAEQRLIFERPPPNVRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISKASARQRRGRAGRVQPGECYHLYPRCVYEAFADYQLPELLRTPLNSLCLQIKSLQIGSIAEFLSAALQAPESLAVRNAIDFLKMIGALDENESLTNLGKYLAMLPVDPKLGKMLIMGAIFRCFDPVLTVVAGLSVKDPFLLPQDKKDLAGIAKARFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLRAIHSIRKQFSFILKDAGLINDDASTDNKLSHNQSLVRAVICSGLFPGIASVVHRETSMSFKTKDDGQVLLYANSVNARYQTIPYPWLVFGEKVKVNTVFIRDSTGVSDSILMLFGGALFRGSQPGHLHMLDGYAEFFVDPNVAECYCKLKEELDKLLQKKLEVPTIDILKEGKYLMFAIQELILGDQCEGRFVFGRESKKPKDSTDSNKFSKDGMNPKSLLQTLLMRAGHAPPKYKTKHLKTNEFRALVEFKGMQFVGKPQRNKQLAEKDAAVEALAWLTHTDNNDRDEDDDSRPDVTDNMLKLLGKRRKSKRRGG*

Click here to download the sequence:
Link to NCBI Protein BLAST